Candidatus Nitrososphaera evergladensis: NTE_00436
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Entry
NTE_00436 CDS
T03224
Name
(GenBank) transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
nev
Candidatus Nitrososphaera evergladensis
Pathway
nev03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nev00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NTE_00436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nev03021
]
NTE_00436
Transcription machinery [BR:
nev03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NTE_00436
Prokaryotic type
Archaeal type
TFB
NTE_00436
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Cyclin_C
Zn_ribbon_LysW
Ribosomal_S27e
DUF4129
Trm112p
Motif
Other DBs
NCBI-ProteinID:
AIF82518
UniProt:
A0A075MMN0
LinkDB
All DBs
Position
360643..361647
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AA seq
334 aa
AA seq
DB search
MQTTLVCFACGNELLISDQESGEIVCGYCGVVLAEREEDLAHDARTFFDDFKDGRRTGPR
YSLSQNNKGFSTKMGRRIYVSGTLPEGSSIKLRDFGRIKVWDSRIRNSHEKGLRPAFHYL
QGIRENLGLPDAVVERSAYFIRKASELGLTKGRTIVSITAASVYLACRESETPRSLAEVA
KASNTDRRRLSKDYRLLLRTFNENLPVTSMSRCVTKIANMVGVSESKKRQAIELVNALES
VGVSTGKSPLGFAASVIYLVCKNTNEERTQKLLAEVAGVTEVTIRNRYAELVKLITSRKV
LVFDASLLSILAPVSVYLVVIAQHMWRHLPVIAH
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaactcttgtttgctttgcatgcggaaacgagctgttgatatccgaccaagag
tcaggagagattgtctgtggttattgcggagtcgtattagctgaacgagaagaggatctt
gcgcacgatgcccggaccttttttgacgattttaaagacggaaggaggaccggcccccgt
tattctttatcgcaaaataacaaaggattctctacaaagatgggcagaaggatctacgtg
tcaggcacactgcctgaaggttcttccataaaattgcgcgattttggtagaatcaaggtt
tgggactcgagaataaggaattcccatgaaaaggggcttaggcctgcctttcattatctt
caagggatccgtgaaaaccttggccttccagacgcggtggttgaaaggtctgcatacttt
atcagaaaggcaagcgaattgggcctaacaaaggggcgcaccatcgtatcgattacagcg
gcatccgtgtatcttgcatgtcgagagtctgaaaccccgcggagccttgccgaagtcgct
aaggctagtaacactgaccgcagacggctttcaaaagactacaggcttctcttgcgtacc
tttaacgaaaatctcccagtcacttccatgtctagatgtgtcaccaaaatagcaaacatg
gttggtgttagcgaatccaaaaagaggcaggcaattgagctcgtaaatgcattggagtct
gtcggagtgtctactggcaagtcccctctcggatttgcggcttcggttatctatcttgtt
tgcaagaataccaatgaagagagaacccaaaaacttcttgccgaagttgccggtgtcaca
gaagtgacgataaggaacaggtatgccgagctggttaaactgattacgtcaagaaaggta
ctggtttttgatgcgtcattactatccattttggcgccggtttctgtatatcttgtcgtg
atagctcagcatatgtggagacatttgccagtgattgcacattaa
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