Candidatus Nitrososphaera evergladensis: NTE_01338
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Entry
NTE_01338 CDS
T03224
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit/40 kD subunit
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
nev
Candidatus Nitrososphaera evergladensis
Pathway
nev03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nev00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NTE_01338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nev03021
]
NTE_01338
Enzymes [BR:
nev01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NTE_01338
Transcription machinery [BR:
nev03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
NTE_01338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_L_2
RE_endonuc
Motif
Other DBs
NCBI-ProteinID:
AIF83406
UniProt:
A0A075MPC9
LinkDB
All DBs
Position
complement(1116417..1117169)
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AA seq
250 aa
AA seq
DB search
MYLCVSTPSSCKPIIFASFGRFLRTFWELPEVLASPSVEVVEKSDNRIVVKFNNIPRQYV
NALRRLAISEVPTLAIDDVVILENSSVMHDEAVAHRLGLIPLRTDPGRFVMPHECDCGST
LGCSKCRVLLVLDAEATDKTKVVTSGEMVSEDEMVKPVSKDIPIVVLAPSQKLKFEAYAR
LGVGKQHAKWQPTSAAVVKDGKDESEIVLIIETNGALTAEEILKESTERLQSKIKNFKQV
IGSLKVPKSA
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgtatttatgcgtgtcaactccttcttcctgcaagccgataatttttgcaagtttcggt
agatttttaaggacgttttgggaacttccggaagtattggcttctccttcggtcgaagtt
gttgaaaaatcagataacaggatcgttgtcaagtttaacaatattccaaggcagtacgtc
aacgcgctcaggcgccttgccataagcgaggtcccgacgcttgcaatcgatgatgtcgta
atccttgaaaactcgtcagtcatgcacgacgaggcagtggcccaccgcctcggcctcata
ccgctcaggacggaccccggcaggttcgtgatgccccacgagtgcgactgcggaagcacg
cttggttgctcaaagtgcagggttctcctggtgcttgacgcagaggccaccgacaagacc
aaggtcgtcacttccggcgagatggtttcagaagacgagatggtcaagccggtgagcaag
gacatcccaatagtcgtgctcgccccaagccagaaactaaagtttgaagcgtacgcacgc
cttggcgtaggcaagcagcacgccaagtggcagcccacgtcagcagcagtagtcaaggac
ggcaaggacgaaagcgaaatagtgctcattatcgaaacaaacggcgcccttacggcagaa
gagatactgaaagaatccacggagcgcctgcagtccaagatcaagaacttcaagcaggtc
ataggctcgctcaaggtacccaagagcgcctag
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