Candidatus Nitrososphaera evergladensis: NTE_01473
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Entry
NTE_01473 CDS
T03224
Name
(GenBank) Transcription initiation factor IIB (TFIIB)
KO
K03124
transcription initiation factor TFIIB
Organism
nev
Candidatus Nitrososphaera evergladensis
Pathway
nev03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nev00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NTE_01473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nev03021
]
NTE_01473
Transcription machinery [BR:
nev03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NTE_01473
Prokaryotic type
Archaeal type
TFB
NTE_01473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Sigma70_r4
Zn_ribbon_tTFIIB
HTH_AsnC-type
HTH_Tnp_ISL3
Cyclin_N
zf-CCHC_5
HTH_3
HEF_HK
Lar_restr_allev
LacI
Auto_anti-p27
Zn_Ribbon_1
Ribosomal_L37e
Ribosomal_S27e
RB_B
Ribosomal_S27
Motif
Other DBs
NCBI-ProteinID:
AIF83537
UniProt:
A0A075MRU0
LinkDB
All DBs
Position
complement(1243719..1244615)
Genome browser
AA seq
298 aa
AA seq
DB search
MFGDRCPRCGRGSMVTDNSSGELFCGNCGFVVSERIEEMGPEWRAFSKEEHEDRSRAGIP
TSLAMHDMGLATIIGPVDKDASGKPLSASMKSTIERLRTWDSRSQVHEPVDRNFRQAFSE
LDRLKDKLAVGDAVIEKAAYVYRKALEKGLVRGRSISALVAAALYAACRDTETPRTLKDI
ANASNIKKKDVARCYRLLIRELDLKMPVVDPVKCVARIASKAGLSEKTKRKALEILKKAE
EGKISAGKDPMGLAAAALYVACVMNGENKTQKDVAEAAGVTEVTIRNRYKGLKTHLKL
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcgaccgctgcccccgttgcggcagagggtcaatggtcacggacaactccagc
ggagaactgttttgcggtaactgcggtttcgtggtaagcgaaaggatagaggaaatgggc
ccggagtggcgcgccttttccaaagaagagcacgaggacaggagcagggcaggcatcccg
acgtcgcttgccatgcacgacatgggccttgccacgatcatcggcccagtcgacaaggac
gcctctggcaagcctctttccgcgtccatgaagagtacaattgaaaggctcaggacgtgg
gacagcagaagccaagtgcacgagccggtagaccgcaacttccgccaggcgttctctgag
cttgaccgcttgaaggacaagcttgcagtgggcgacgcggtaatcgaaaaagctgcctat
gtttacagaaaggcacttgaaaaaggcctggtacgcgggcgctccatatccgcacttgtc
gcagcggcgctttatgcggcgtgccgcgacaccgagacgccaaggacgctcaaggacatc
gcaaacgcaagcaacatcaagaaaaaggatgttgcaaggtgctaccgcctcctcatccgc
gaactggacctgaagatgccagtcgtcgacccggtgaaatgtgttgccaggattgcaagc
aaggcaggcctttcagaaaagacaaagaggaaggcacttgaaatcctgaaaaaggcagaa
gaaggcaagatctctgcaggcaaggacccgatgggcctggcagcagctgcgctgtacgtg
gcgtgtgtcatgaacggcgagaacaagacgcaaaaagacgtggcagaggcggcaggcgtg
acagaagtgaccatccgcaaccgctacaagggcctaaagacgcacctcaagctttga
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