Candidatus Nitrososphaera evergladensis: NTE_01754
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Entry
NTE_01754 CDS
T03224
Name
(GenBank) single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
nev
Candidatus Nitrososphaera evergladensis
Pathway
nev03410
Base excision repair
nev03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NTE_01754
03430 Mismatch repair
NTE_01754
03440 Homologous recombination
NTE_01754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nev03400
]
NTE_01754
DNA repair and recombination proteins [BR:
nev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NTE_01754
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NTE_01754
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NTE_01754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
AIF83815
UniProt:
A0A075MRU4
LinkDB
All DBs
Position
1460712..1462160
Genome browser
AA seq
482 aa
AA seq
DB search
MGDGDSSKLLSALKPFCEKLRSVVESGSEISVITHLDADGITSGSIIGTALARMGAKCSV
RTVSDMTPSVIEQMKAEDHEFYVVTDLGGGMAANFRKALGDRWVVIDHHQIPEEEILTDD
AGQVLNAWKYGIDGGIEVPAGGMAYMVASTLDRKNRDLSPVAVVSAVGDRQDQGDKKSFL
GLNKAILETAKTLGLVNVDLDIMLTGRETRPLHEALAFTSFPYIDGLTWNRDNCHALLKG
AGIKLKDGNGRWRVPAEFSQEEKSAILDAIAKFVVTSSKTSATVIDDLVGYVYTLAGEDK
RSQLRDAREFSTLLNACGRIGRSGVGIAICMGDRNAMLTAGEEISTEYRTTLRNYISTIF
SEKWRVSDDGKMALINGDGLVAEDMLGAVSSLLSGSPTLAGRLVFVRSLSKDGTYKFSSR
KGLGCTSPANLGLVMRHCAESVKGTGGGHSAAAGCRIPSTTLDPFLSCLRSAVNDAKFAT
AS
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacggcgacagttcaaagctcctctctgcgcttaaacctttttgcgaaaagctc
cgctctgttgtagagagcgggagcgagatttctgtcataacgcaccttgacgccgatggc
atcacttccggaagcataatcggaacggctctggcgcgcatgggtgccaagtgctccgtc
aggacggtgtctgacatgacgccgtccgtgatagagcagatgaaggccgaagaccacgag
ttttacgtcgtaaccgaccttggaggcggcatggccgcaaatttccgcaaggcccttggc
gacaggtgggtggtaatcgaccatcaccagatcccggaggaggagatcctgacagacgac
gcgggccaagtgctaaacgcctggaaatatggcattgacggcggcatcgaggtgcctgct
ggcggcatggcctacatggttgcaagcacccttgaccggaagaaccgcgacctttcgccc
gtggcagtcgtttctgcagtcggcgataggcaggaccagggcgacaaaaagtcgtttctt
ggcctcaacaaggcgatacttgaaaccgccaagacgcttgggctggtcaacgtcgacctt
gacatcatgctgacaggcagggagacgcgccccttgcacgaggcacttgctttcacgtcg
tttccctatatcgacgggctgacgtggaaccgggataactgccacgctctgctaaagggc
gccggcataaagctaaaggatggcaacgggcggtggcgcgtgccagccgagttttcgcag
gaggaaaaaagcgctattctggatgcgattgccaagttcgtagtcacgtcgagcaagacg
tctgcaaccgtcatcgacgacctcgttggctatgtttacacgcttgccggggaggacaag
cgcagccagctgcgcgacgcaagggaattctcgaccctcctaaatgcatgcggcaggata
ggcaggtccggcgtcgggattgccatctgcatgggcgacaggaacgccatgctcacggcc
ggtgaggagataagcacagaataccggacgactctgcgcaactatatttcaacaatattt
tcagaaaagtggagggtgtcagacgacggcaaaatggcgctcataaacggcgacggtctc
gttgcggaggacatgctgggcgccgtctcgtcgctcctctccggttcgccgaccctggcc
ggcaggctcgttttcgtaaggtcgctttccaaggacggcacctacaagttctcgtcaaga
aagggtcttgggtgcacgtcgccggcaaacctcggccttgtgatgcgccactgcgccgag
tctgttaaaggcaccgggggcggccattcggctgcggcaggctgcaggataccttcaacg
acacttgatcctttcctttcatgcttgaggtcagcggtaaatgacgcgaaattcgcaaca
gcatcctga
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