Candidatus Nitrososphaera evergladensis: NTE_01902
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Entry
NTE_01902 CDS
T03224
Name
(GenBank) peptide chain release factor subunit 1 (aeRF-1)
KO
K03265
peptide chain release factor subunit 1
Organism
nev
Candidatus Nitrososphaera evergladensis
Pathway
nev03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nev00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NTE_01902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nev03019
]
NTE_01902
03012 Translation factors [BR:
nev03012
]
NTE_01902
Messenger RNA biogenesis [BR:
nev03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
NTE_01902
Translation factors [BR:
nev03012
]
Eukaryotic type
Release factors
NTE_01902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_1
eRF1_3
acVLRF1
baeRF_family10
Zn_ribbon_8
HypA
YrbL-PhoP_reg
Zn_ribbon_RRN7
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
AIF83961
UniProt:
A0A075MQY0
LinkDB
All DBs
Position
complement(1572173..1573453)
Genome browser
AA seq
426 aa
AA seq
DB search
MVNSGNGAEKWDSVKRYKLTKMINELSSIAGHGTELVTVYVPPRRPIFDVISQLRNEAGT
ASNIKSDLTRNHVQDALSRTMEHLKLFKETPENGLVIFCGAIPTGKGFGTEKIELTSVIP
PKPVQISLYRCDDHFWTDHLREMLKDEKVIGILAIDTQEAGLGILTGDRWEAIDSLTSGV
AGKHRQGGQSARRFERLRDNELNEYYHRVADHAKAVFIDQFNVKGIIVGGPGPTKESFLK
EEYLDYRLQNNVLATLDTSYSGDEGVREIIDKAQKDGILAEFRVMEEKQLVKKFMGEVHS
SKGLGIYGIFDVVKALQGNMADLVLVTSDISYMKLDFKCKSCKNVQEKIIDRAALTATKQ
EILSKPCPVCGASDFEVVEKDIVDYLQELATMTGTRLEVISGQTEEGAQLGSLGKIGAIL
RYRIMQ
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatagtggcaacggcgcagaaaagtgggattcggtcaagcggtacaagctgacc
aagatgataaacgaactgtcaagtatagccggccacggcaccgagcttgtcaccgtctat
gtgccaccaaggcgcccgatatttgacgtcatctcccagctgcgcaacgaggcaggcacg
gcttctaacataaagtcggaccttacacgaaaccacgtgcaggacgccctgagcaggacg
atggagcacctaaaactattcaaagaaacgcctgaaaacggcctcgtgatattctgcggc
gccataccgacgggcaagggctttggcaccgaaaagatagagctgacgtcagtcattccc
ccaaagccggtgcagatcagcctgtacaggtgcgacgaccatttctggacggaccacctc
agggagatgctaaaagacgaaaaggtgataggcatccttgcgatagacacgcaggaagca
ggccttggcatactgactggtgacaggtgggaggcgattgattcattgacttctggcgtc
gcaggcaagcacaggcagggagggcagtcggcccgaaggtttgagcgcctgcgcgacaac
gagctgaacgaatactaccaccgcgttgcggaccacgccaaggcggtctttatcgaccag
ttcaacgtcaagggcataatcgtcggcgggccgggccccaccaaggagagtttcctaaag
gaagagtaccttgattaccgcctgcaaaacaacgtgctggctacgcttgacacctcgtac
tctggcgacgagggcgtgcgcgagataatagacaaggcgcaaaaggacggcatccttgca
gagtttcgtgtcatggaggaaaagcagctcgtcaaaaagttcatgggagaggtccattcg
agcaagggcctgggcatctatggcattttcgacgtcgtaaaagccctgcagggcaacatg
gcagacctggtgctcgtcacaagcgacatttcgtacatgaaactggatttcaagtgcaag
tcgtgcaagaacgtgcaggaaaagataatcgaccgcgcggcactcacggcgaccaagcag
gagatcctgtcaaagccgtgccccgtctgcggtgcatccgactttgaagtcgttgaaaag
gacatcgtagactacctccaagagcttgctacaatgacggggacaaggcttgaggtgatt
tcaggccagacggaggaaggcgcgcagctaggatcgcttggcaagataggcgcgattctg
cgctacaggatcatgcagtag
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