KEGG   Candidatus Nitrososphaera evergladensis: NTE_02637
Entry
NTE_02637         CDS       T03224                                 
Name
(GenBank) transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
  KO
K03124  transcription initiation factor TFIIB
Organism
nev  Candidatus Nitrososphaera evergladensis
Pathway
nev03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:nev00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    NTE_02637
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nev03021]
    NTE_02637
Transcription machinery [BR:nev03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     NTE_02637
 Prokaryotic type
  Archaeal type
    TFB
     NTE_02637
SSDB
Motif
Pfam: TFIIB Zn_Ribbon_TF Sigma70_r4 HTH_AsnC-type Trm112p HTH_11 HTH_Tnp_ISL3 HARE-HTH Sigma70_r4_2 HTH_Crp_2 RB_B
Other DBs
NCBI-ProteinID: AIF84680
UniProt: A0A075MU28
LinkDB
Position
2178384..2179289
AA seq 301 aa
MKTSLVSPCKHEKTVTDPESGEIICRSCGLVISDKIQEMRPEWRAFTSQEADDRARTGIP
SSLARHDMGLSTVIARTDKDASGRLIEGVMKSTMDRLRAWDFRTQAHSPTDRNLRQAFSE
LDRLKDKLSLSDAVVEKTAYIYRKAQERGLVRGRTISATLGAALYIAIRETGMSRTLKDI
AETSNVKRKDLARMYRLVVLELDLKIPMIDPMKCIARVASKSGLSEKTKRHAMNIMYDVV
KSGMSAGKDPMGLAASVLYMASLETGENRTQTDIAEAAGVTEVTVRNRYKNLKSRLDSLA
N
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaaaacatcactagtatccccgtgcaaacacgaaaagacggtcacagacccagagtct
ggcgagattatttgccggagctgcggacttgtgatatcggacaagatacaggagatgcgg
cccgaatggcgcgcgtttacctctcaggaggcagacgacagggcgaggactggaatcccc
agttcccttgcacgccatgacatgggcctgtctacagtgattgcaaggacagacaaggac
gcaagcgggcgcctgatagagggtgtcatgaagtctacgatggacaggctgagggcgtgg
gatttccgcacgcaggcccactcgccgactgacaggaacctcaggcaggcgttctcggag
ctggacaggctaaaagacaagctgtcgctgtccgacgccgtggtggaaaagacggcttat
atatacagaaaagcgcaagagcgcggtcttgtaaggggcagaaccatatctgcaaccctg
ggagctgcgctgtacattgcgatacgtgagacaggcatgtcaaggacgctcaaagacatc
gccgagaccagcaacgtcaaacgcaaggacctggcaaggatgtacaggctcgtagtgctt
gagctggacctgaaaatcccgatgattgacccgatgaaatgcattgcaagggttgcaagc
aagtcgggattgagcgaaaagaccaagcgtcatgctatgaacataatgtatgatgtagta
aagagcggcatgtccgccggcaaggacccgatgggacttgccgcatcagtgctgtacatg
gcgtcgcttgagacaggcgagaacaggacccagacagacatcgccgaggccgcgggagtc
accgaagtgaccgtcagaaacaggtacaagaatctaaagagccggcttgattcgctggcg
aattag

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