Candidatus Nitrososphaera evergladensis: NTE_03427
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Entry
NTE_03427 CDS
T03224
Name
(GenBank) P pilus assembly protein, porin PapC
KO
K20276
large repetitive protein
Organism
nev
Candidatus Nitrososphaera evergladensis
Pathway
nev02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nev00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NTE_03427
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SdrD_B
CarboxypepD_reg
Big_1
Big_5
THSD1_N
Big_6
GBD_IRG7_N
Motif
Other DBs
NCBI-ProteinID:
AIF85455
UniProt:
A0A075MW23
LinkDB
All DBs
Position
complement(2836772..2841769)
Genome browser
AA seq
1665 aa
AA seq
DB search
MSVSAIILSTLLLFSIMYANPLLISKSISHLESLQSINAANIFQSLSLHAMQSSSNNNNS
AEQQSSISLSIPLGVAYADSRSNNSTTSTSSTEDTADAGSGGIQSGNPTVLLSGTLYNDK
NANGKRDLDDSGISGASIQVSYRPNGTSSQEHGETLKTGEDGSYRTFLPSTSTLIGIQTA
VPEGYFETEGGDVHNPSWDNNNNNSSTLTSSFLYNDVQQISGKNIDFGFASIKDSAILVT
GMVYEDLNGNGKRDSGEPGISDVGINISYLHPFTEYRIQTLSDGTYQAFLSPTAELVSES
SSEPEGMTRTQPVNDVQIDNTTRTIASGIYEFGNLGSLTGPIQNIDFGYANPVANLTVRL
QDENGNSIKGPSISFNDATTGQYIDTKKVDENGSVSISWIPAHKVNASIEMGSILYHAPN
RNETIITLTRGRNNQIIHLDALKRESVAGTVTDVGGRPIDGMTITASEKVDSRNWFYSST
TDNAGHYNFTLLQGLVTIKGSNASYIVNDKSLDLNKADSPVKVDLTAELMPIHNVTTNVY
SKYVGSGWVGPVNPSSENFFTAELTDEFGNHHYPRSDGLISFRGVLGDKIEECVRPYATF
RLPESCRSMVLNDTQSIAASFYLQEGGRIEGRVIDAVTADPVSSWNAYLYSLNNDGRREW
ISSFWNNSQIIDVSVPKAGLYQLDIYSTYNDTDVSSHGSINPSNHFAQITTMVDNDKSAL
VGDVKLLRERSVVRNEGNAIASTPATAAPGNTITLHVSFNSIITQGMKNTPVLLLEVPAN
TTLVDKSIVLNGKQAAANYDGGAFYQIPLDGVVNGTSLAGTATYKIRLNDDFDKDGLNIS
AFLQYDSLESDGGIQKRQEVIGSLHIPVPQLSIDIPHQLTQRGTMVSGQGPAGGKIELYD
GNTLLGQTDVSQGGFWRMNVTLPDSGDPAVHVLHANGIIINSSSKILHSRDATVIFDSTS
PKLIEVCMQQDLNNRVCVNPELGVARFPYLSVWQYPYNFELRFDHPERVSDVKVFLDGTG
GGMGNATLGSDGVYRATIVPSDNKSLGNVDVVYKLVPPDNISKVRIPTLPIQIPPPAGPS
PGKLTIQDNNETDFSGRVSLEDGTVYKFASHATKNVKHTPTIAEIKEAISTQHPIFPISI
VQTDVNGGLAIKGEVFVPDGAFSSEESGSTKTDFLDVSVDEELHGTLVDFALAPEDSGMQ
AKSVGNLQSVNYLGTAILQGQIVAHPNGITRGALAGVIGTIVGAQLGMAGLLAAYSTISF
LGALGTAFGIGAVLAAGICWAICDEVDPTYLFDPSGFVYEAVPSNRLQNVTATILEQDPK
TKQWHVWDAQEFGQINPETVDSDGHYAWDVPEGDWKITYQKPGYQQASSEIIHEPPPRYD
VNIGMVSLAAPSVIAVSALAHVDGGTSKNTNSSSIRVQFDKYILANNVENTTITVAGLNG
ITIPVSTVNAPDGKLLTREIDFVPSQPLVEGSTYSLHVTHRSIVSYASVPMDGDYDDKVV
AIGKTSYDLQLTSNGHSLITNSLTNIENADTTSAAVSVTLGQPLIAIAKTNDNLASKTII
IHWSGPDGKIRKTESASPTMNDDTLVSQPFYPTETGQWTATATFADGTPDNSIASKTRNF
TVNYDAPVPEFGLNNIAGIIAAISIAISIIITKTGNFSLFGRRWP
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtatccgcaataatcctaagtactttactcttgttttccatcatgtatgcaaac
cctcttcttatcagcaagagcatttcgcatcttgaatctttacaaagcattaatgccgca
aatatctttcaatctttatccttgcatgccatgcaatcaagtagcaataacaacaactcc
gcagaacaacaatcatccattagtttgtcaattccgcttggagtcgcgtatgcagatagc
agaagcaataactctactacatcaacttcaagcactgaagatactgcggacgcaggcagt
ggtggcattcaaagcggcaacccgaccgtcctgctttctgggacgttgtacaatgacaag
aatgccaatggaaagagagatcttgacgactcgggaatatccggagcttcaatacaagta
tcgtatcggcctaatgggactagctctcaagaacacggtgaaactctgaaaacgggtgag
gacggctcatatcggacgttccttccaagcacctctaccttgattggtattcaaacggca
gtacctgaaggctactttgaaactgaagggggagatgtgcataacccgtcttgggataat
aataacaacaacagcagcaccctgacaagcagtttcctttacaatgacgttcagcagata
agcggaaaaaatatcgattttggatttgcttctattaaggactctgcgattctagttacg
ggtatggtgtatgaggacctgaatggtaatggcaaaagggattctggagaacccggcatt
tctgacgtcggtattaacattagttacctgcatccatttacagaatatcgcattcaaacc
cttagcgatggaacgtaccaggcttttctctcaccaactgcagaattggtttctgaatca
tccagcgaaccggaaggcatgactaggacgcagccggtaaatgatgtacagattgataac
actacgcggacaattgccagtggaatttatgaatttggtaatcttggcagcttgactggg
ccaatccaaaacatcgactttggctatgcaaatcctgtggcaaatcttactgtgcgattg
caagatgaaaatggaaacagcataaagggcccatctatttcatttaatgatgctactacg
ggtcagtacatagatacaaagaaggtggacgaaaatggcagcgtatcgatctcttggatc
cctgctcataaggtaaatgccagcatcgaaatgggaagcatcctctatcatgccccaaat
aggaatgagacaattatcacgctaactcgaggtcggaataaccaaataatccatctcgat
gccctgaaaagagagtctgtagctggtacggtcacagacgttggcggcagacccattgat
gggatgaccataacggcatcagaaaaagttgacagcaggaattggttctactcctctacg
actgataatgcaggtcattataatttcacgctgctgcaaggactcgttacaatcaagggc
tccaatgcaagttacattgtcaatgacaagagtctagatttgaataaagcagacagccct
gtcaaggtggatctaaccgcagagctcatgcccatccataacgttactacgaacgtctac
tcaaagtacgttggatcagggtgggtaggacccgtaaatccttcatcggagaactttttt
acggcggaactgacagatgaatttggtaatcatcattatcctagatctgacgggctaatt
tcttttcgcggagttctgggggataagatagaagaatgtgttcgcccatatgctacgttc
cgcctgccagaaagctgtagaagtatggtgctgaacgatactcagagcatagctgccagt
ttctatttgcaagagggtgggcggatagaggggcgagtaattgatgctgttacagccgat
cctgtttccagctggaacgcgtacctttattcattgaataatgacggccgccgggagtgg
atttctagcttttggaacaactctcagataattgatgtatctgtccctaaggcgggcctg
taccagttggacatatacagcacgtataacgataccgatgtgagctcgcatggtagtata
aatcccagcaaccattttgcccaaatcacgacgatggttgacaatgacaagagcgcactt
gttggcgatgtaaagctactccgcgaaagaagcgttgtgcgaaatgaaggaaatgccatt
gccagcacccctgcaacagcagcgcctggaaatacaattacgttgcatgtttcattcaac
agcataatcacacaaggaatgaaaaatactcctgttctgctattagaagttcctgctaac
acaacattggtagacaagagcattgtgttgaatggaaaacaagctgccgcaaattatgac
ggaggagcattctaccaaattccacttgatggtgttgtaaatggcacctcattagctggc
actgccacgtacaagatcaggctgaatgatgactttgacaaggatgggcttaacattagt
gccttcctgcaatatgactcgttggaatccgacggcgggattcagaaacgacaggaagtg
ataggttccttacacataccggtgccccaactcagtattgatattccccaccagctgacc
caacgaggtacaatggtatcaggccaaggtcccgctggaggcaaaatagaactgtacgat
ggaaatactttgcttggtcaaaccgatgtttcacagggcggattctggaggatgaatgtt
acgctgcccgatagcggtgaccctgccgtgcacgttttacatgctaatggcatcatcatc
aattcttcatcaaaaattctgcattcacgcgatgctactgtaatatttgatagcacatct
ccaaaactaatcgaggtatgcatgcagcaagacttgaacaaccgcgtatgcgtaaatcca
gagctgggcgttgcacgctttccatatctttcagtctggcagtatccctataattttgaa
cttcgctttgaccatcccgagcgagttagtgacgtaaaggtttttcttgacggtacgggt
ggaggcatgggaaatgctaccctgggcagcgatggagtttaccgggcgacaatcgttcct
tcggacaacaagtcgcttggaaatgttgatgtggtatacaagctcgtaccgccagacaac
atctcaaaggtacggatcccgacgcttcctattcagattccacccccggctgggccttcg
cctggaaagctcacgatccaggataacaacgaaactgacttttcaggcagagtatcccta
gaagatggcaccgtctacaaatttgcatctcatgccaccaagaatgtcaagcatactcca
acaattgcagaaatcaaagaagcaatatccacgcagcatccaatcttcccaatttccata
gtccagacagatgttaacgggggtctggcaattaagggtgaagtctttgtacctgacggc
gccttctcttccgaagagagcggctcgacaaaaaccgactttcttgatgtatctgttgat
gaagaattgcatggaacactggtagactttgcccttgccccggaggattcgggtatgcaa
gcgaaatctgtcgggaatttacagtcagtaaattacctaggaacagcaatacttcaagga
caaatagttgcacatcctaacggaataacacgtggtgcccttgcgggagtaatcggcact
attgttggagctcagcttgggatggctggtctactggctgcttactccactatttctttt
cttggcgcacttggaacggcatttggcattggcgctgttcttgctgctggtatctgctgg
gcgatctgcgacgaagtcgatcccacctacttgtttgatcccagcggctttgtttacgaa
gcagtcccctcaaataggttacaaaacgtcacagccacaattcttgagcaggatccgaaa
accaagcaatggcatgtgtgggatgcccaagaattcggtcaaataaaccctgaaactgtt
gattcggatgggcactatgcatgggatgtcccagaaggcgattggaagataacctatcaa
aaacccggataccagcaggcatcaagtgaaataattcatgagcctccacctagatacgat
gttaatataggaatggtatcacttgctgcaccatcggttatcgcagtctctgccttggct
catgtggatggaggtaccagcaagaatacaaattcctcgtcgataagagtgcagtttgac
aaatatatattggcaaacaatgtggaaaatacgacaataaccgtcgcagggctgaatggg
attacaatccctgttagcacggtcaatgcccctgatggcaaattgctgacccgcgaaatc
gactttgtgccttcccaaccccttgttgaagggagcacgtattctttgcatgtaactcac
agaagcattgtaagctatgcctcggtgccgatggatggcgactatgatgataaggtagtc
gcaataggcaaaacatcttacgacttgcagctgacgagcaacggccattccttgatcaca
aattctctcacaaatatcgagaatgctgacacaacctctgcagctgtctccgtaactctt
ggccaacctttgatcgcaatcgccaagacaaatgataacttggcatcaaagacaatcatc
atccactggagcggaccagacggcaaaataaggaaaacagaatctgcttctccgacaatg
aatgatgatactttagtgtcacagccattttatccaactgagaccgggcaatggacggcg
accgcaacatttgcagatggaacgcctgacaactctatcgcatccaagacgcgcaatttt
acggtgaattatgatgccccagtgccggagtttggtctcaacaacattgccggcattatt
gcggctatctctatagctataagcattattattacaaaaactggcaatttctcgctcttt
ggcagaagatggccttga
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