Nocardiopsis exhalans: NE857_00795
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Entry
NE857_00795 CDS
T08285
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
nex
Nocardiopsis exhalans
Brite
KEGG Orthology (KO) [BR:
nex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nex03032
]
NE857_00795 (gyrB)
03400 DNA repair and recombination proteins [BR:
nex03400
]
NE857_00795 (gyrB)
Enzymes [BR:
nex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NE857_00795 (gyrB)
DNA replication proteins [BR:
nex03032
]
Prokaryotic type
DNA Topoisomerases
NE857_00795 (gyrB)
DNA repair and recombination proteins [BR:
nex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NE857_00795 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
PEPcase_2
Motif
Other DBs
NCBI-ProteinID:
USY23100
UniProt:
A0ABY5DGL2
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All DBs
Position
complement(171537..173453)
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AA seq
638 aa
AA seq
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MTVLEGLEAVRKRPGMYIGSTGERGLHHLVYEVVDNSVDEALAGHADAIEVTLLADGGIR
VADNGRGIPVGIHPVEKRPAVEVVLTTLHAGGKFDGKSYAVSGGLHGVGISVVNALSTAL
DVEIRQQGHVWRQHYEMTAPTGELIKGEETDETGTQITFWADGSIFETTTFSFETLARRM
QEMAFLNKGLSITIRDERPDHIDDAPVVNTFHYEEGLSDYVRHINAKKEPAHASIISFEE
EGEGIAVEVAMQWNQSYTSSVHTFANTINTAEGGTHEEGFRSALTTLVNRYARDQKLLRD
KEDNLTGDDIREGLTAIISVKLADPQFEGQTKTKLGNTEAKSFVQKVTNEHLRDWFERNP
GEGKDIVSKASQAARARVAARQARDLTRRKTLLETTSLPGKLSDCQSTNPEECEVYIVEG
DSAGGSAKGGRNPHNQAILPIRGKILNVEKSRIDRILKNNEVQAIITALGTGIHEEFDAE
KLRYHKVILMADADVDGQHIRTLLLTLLFRFMKPLVEAGNVYLAAPPLYKIKWDQKGSDA
GYAFSDAERDRLIEAGIAEGKRDPRPRDMVQRFKGLGEMNANELWDTTMDPDRRVLLQVS
LEDAAQADEMFSVLMGEDVESRRAFIQRNAKDVRFLDI
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atcacggttctcgaggggcttgaggcagtacgcaagcgcccaggcatgtacatcggctcc
accggggagcggggtctgcaccacctggtctacgaggtggtcgacaactcggtcgacgag
gcgttggcgggtcacgccgacgccatcgaggtgaccctgctcgccgacggcggcatcagg
gtggccgacaacggtcgaggtattccggtcggcatccaccccgtggagaagcgtccggcc
gtggaggtcgtcctcaccacgctgcacgcgggcggcaagttcgacggcaagtcctacgcc
gtctccggcggtctgcacggtgtcggcatctccgtcgtcaacgcgctgtccactgccctg
gacgtggagattcgtcagcaggggcacgtctggcgccagcactacgagatgaccgccccc
accggcgagctcatcaagggcgaggagactgacgagaccggtacccagatcaccttctgg
gccgacggcagcatcttcgagaccaccacgttctcgttcgagacgctggcccgccggatg
caggagatggccttcctcaacaaggggctgtccatcaccatccgcgacgagcggcccgac
cacatcgacgacgccccggtggtcaacaccttccactacgaggaagggctgtcggactac
gtccggcacatcaacgccaagaaggagccggcgcacgcgtcgatcatctccttcgaggag
gagggcgaaggcatcgcggtcgaggtcgccatgcagtggaaccagtcctacacctcgtcg
gtgcacaccttcgccaacaccatcaacacggcggagggcggtacgcacgaagagggtttc
cgctccgcgctcaccactctggtcaaccggtacgccagggaccagaagctgctgcgcgac
aaggaggacaacctcaccggtgacgacatccgcgagggtctgaccgcgatcatctcggtc
aagctcgccgacccgcagttcgagggccagaccaagacgaagctcggcaacaccgaggcc
aagtccttcgtccagaaggtcaccaacgagcacctgcgcgactggttcgagcgcaacccg
ggtgagggcaaggacatcgtgtccaaggccagccaggccgcccgtgcccgggtcgccgcc
cgccaggcccgcgacctgacccgccgcaagaccctcctcgagaccacctccctcccgggc
aagctgtcggactgccagtccaccaacccggaggagtgcgaggtctacatcgtcgagggc
gactcggccggtggttccgccaagggtggtcgcaacccgcacaaccaggccatcctgccc
atccgcggcaagatcctgaacgtcgagaagtcccgcatcgaccgcatcctcaagaacaac
gaggtccaggcgatcatcaccgctctgggcaccggtatccacgaggagttcgacgccgag
aagctgcggtaccacaaggtcatcctgatggccgacgccgacgtcgacggtcagcacatc
cgcacgctgctgctcacgctgctgttccgcttcatgaagccgctggtcgaggccgggaac
gtctacctggccgccccgccgctctacaagatcaagtgggaccagaaaggcagcgacgcc
ggctacgccttctccgacgccgagcgcgaccgcctcatcgaggccgggatcgccgagggt
aagagggacccgcgcccgcgcgacatggtgcagcgcttcaagggtctgggcgagatgaac
gccaacgagctgtgggacaccacgatggacccggaccgccgtgtcctgctccaggtcagt
ctggaggacgcggcccaggccgacgagatgttcagcgtgctcatgggtgaggacgtcgag
tcgcggcgcgccttcatccagcgcaacgccaaggacgtccgtttcctggacatctag
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