Nocardiopsis exhalans: NE857_07190
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Entry
NE857_07190 CDS
T08285
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nex
Nocardiopsis exhalans
Pathway
nex03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NE857_07190 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nex03400
]
NE857_07190 (mutM)
Enzymes [BR:
nex01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NE857_07190 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NE857_07190 (mutM)
DNA repair and recombination proteins [BR:
nex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NE857_07190 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
USY21390
LinkDB
All DBs
Position
1605083..1605937
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AA seq
284 aa
AA seq
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MPELPEVEVVRRGLSDHAVGRAIGAVEVLHPRSVRRHVPGPADFAGRLSGQTPTAVRRRG
KYMWLVLDSGDMLLVHLGMSGQMLVQPQGKPDEKHLRVRMSLDDGNELRFVDQRTFGHLL
LDQRGERAEVPSSVDHIALDPLDAEFVPDAFVRALRTKRTEVKRALLDQSLISGVGNIYA
DEALWRARLHWARSTRGLTSAQGRELLGHVTDVMTEALEVGGTTFDGLYVNVNGESGYFE
RGLNAYGRRDRPCGRCGTLIVREAFMNRSSFSCPGCQRAPRSRG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacttcccgaggtcgaggtggtccggcgcggtctgagcgaccacgccgtgggg
cgcgcgatcggtgccgtcgaagtgctgcacccgcgttcggtccgccgccacgtgcccggc
cccgcggacttcgcgggtcggctgagcgggcagacgcccaccgcggtccgccgccgcggc
aagtacatgtggctggtgctggacagcggcgacatgctcctggtccacctgggcatgagc
gggcagatgctggtgcagccccagggcaagccggacgagaagcacctgcgggtgcgcatg
tcgctcgacgacggcaacgaactgcgcttcgtcgaccagcgcaccttcggccacctgctg
ctggaccagcggggtgagcgtgccgaggtgccgtcttcggtggaccacatcgccctggac
ccgctggacgccgagttcgtcccggacgcgttcgtccgggcgcttcgcaccaagcggacc
gaagtcaagcgcgctctgctggaccagtcgctgatcagcggtgtgggcaacatctacgcg
gacgaggcgctgtggcgggcgcggctgcactgggcccgctccactcgggggctgaccagc
gcccagggccgggagctgctcggccacgtcaccgacgtgatgaccgaggccctggaggtc
ggcggtaccaccttcgacgggctgtacgtgaacgtgaacggggagagcggttacttcgag
cgcgggctcaacgcctacgggcggcgggaccggccgtgcggccgctgcggcacgctgatc
gtgcgcgaggcgttcatgaaccgctcgtcgttcagctgcccgggctgccagcgggccccg
cgttcccgcggctga
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