Nocardiopsis exhalans: NE857_07250
Help
Entry
NE857_07250 CDS
T08285
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
nex
Nocardiopsis exhalans
Pathway
nex02024
Quorum sensing
nex03060
Protein export
nex03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
NE857_07250 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NE857_07250 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NE857_07250 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
nex02044
]
NE857_07250 (ffh)
Enzymes [BR:
nex01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
NE857_07250 (ffh)
Secretion system [BR:
nex02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
NE857_07250 (ffh)
Eukaryotic Sec-SRP protein
NE857_07250 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
nSTAND3
MMR_HSR1
Zeta_toxin
CbiA
cobW
ArsA_ATPase
AAA
AAA_18
APS_kinase
AAA_16
AAA_33
AAA_25
AAA_31
AAA_30
TsaE
ABC_tran
NPHP3_N
AAA_24
SLFN-g3_helicase
NACHT
AAA_17
Motif
Other DBs
NCBI-ProteinID:
USY21401
LinkDB
All DBs
Position
1622223..1623824
Genome browser
AA seq
533 aa
AA seq
DB search
MFETLSDRLTSVFSSLRGKGRLSEEDINATAREIRLALLEADVALPVVREFISRIKERAR
GEEVSKALNPAQQVIKIVNEELVQILGGETRQIRFGKTPPTVIMLAGLQGAGKTTLAGKL
AKWLSDDRNTPLLVAADLQRPNAVTQLQVVGERAGTPVFAPEPGNGVGDPVEVARESIEH
ARRNNHNVVIIDTAGRLGVDTEMMRQAADIRDAVNPDEILFVVDAMIGQDAVNTAQAFLD
GVGYDAVALTKLDGDARGGAALSIRHLTGRPIMFASTGEKLEDFDLFHPDRMASRILDMG
DVLTLIEQAQRTFDEAEVEKMASTMASDDDFTLDDFLQQMAMVRKLGPIGNLLGMMPGMG
QMREQIDGIDDKDLDRIQAIIQSMTPGERANPKMINGSRRLRIANGSGTQVSDVNGLVTR
FFEAQKMMRKMKNGGGIPGMPGMPGMGGANKKKAKAQAKKAKKGKQRSGNPMKARQQEAE
REAERKRRQEEGPQEMPQLPPGLGGGGGGQPNLPPGFGGPNMPDLSNFKLPKK
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgagacgctttccgaccggctcacatcggtcttctcctcgctgcgcggcaagggg
cggctgtccgaggaggacatcaacgcgaccgcgcgggagatccgtctcgcgctgctcgag
gcggacgtcgcgctgccggtggtccgtgagttcatctcgcggatcaaggagcgcgcccgc
ggcgaagaggtctccaaggccctcaacccggcgcagcaggtcatcaagatcgtcaacgag
gaactggttcagatcctcggtggcgagacccggcagatccgcttcggcaagaccccgccc
accgtgatcatgctcgcgggtctgcagggcgctggtaagaccaccctggctggcaagctc
gccaagtggctctccgacgaccgcaacaccccgctgctggtcgccgccgacctccagcgc
cccaacgccgtcacgcagctccaggtggtcggtgagcgcgcgggcacgcccgtgttcgcc
cccgagcccggcaacggcgtgggcgaccccgtcgaggtcgcccgcgagtccatcgagcac
gcgcggcgcaacaaccacaacgtcgtcatcatcgacaccgcgggccgcctcggtgtggac
accgagatgatgcggcaggccgcggacatccgcgacgcggtcaaccccgacgagatcctc
ttcgtcgtcgacgccatgatcggtcaggacgcggtcaacaccgcccaggccttcctggac
ggtgtcggctacgacgcggtcgcgctcaccaagctcgacggtgacgcccgcggtggtgct
gccctgtccatccggcacctcaccggccgcccgatcatgttcgcctccaccggcgagaag
ctcgaggacttcgacctcttccacccggaccggatggcctcgcgcatcctggacatgggt
gacgtcctcaccctcatcgaacaggcccagcgcacgttcgacgaggccgaggtcgagaag
atggcctcgaccatggcctcggacgacgacttcacactggacgacttcctccagcagatg
gcgatggtccgcaagctcggcccgatcggcaacctgctcggcatgatgcccggcatgggt
cagatgcgcgagcagatcgacggcatcgacgacaaggacctggaccgcatccaggcgatc
atccagtcgatgaccccgggcgagcgcgccaacccgaagatgatcaacggttcccgtcgt
cttcgcatcgccaacggttccggtacccaggtcagcgacgtcaacggcctggtcacccgt
ttcttcgaggcgcagaagatgatgcgcaagatgaagaacggcggcggcatcccggggatg
cccgggatgccgggcatgggcggtgccaacaagaagaaggccaaggcccaggccaagaag
gccaagaagggcaagcagcgcagcggcaacccgatgaaggcccgtcagcaggaggccgag
cgcgaggccgagcgcaagcggcgccaggaggaggggccgcaggagatgccgcagctgccc
ccgggccttggcggtggcggcggtggccagcccaacctcccgcccggcttcggcggcccg
aacatgccggacctgtcgaacttcaagctgccgaagaagtag
DBGET
integrated database retrieval system
