Nocardiopsis exhalans: NE857_09935
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Entry
NE857_09935 CDS
T08285
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
nex
Nocardiopsis exhalans
Pathway
nex03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nex00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NE857_09935 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nex03019
]
NE857_09935 (orn)
03009 Ribosome biogenesis [BR:
nex03009
]
NE857_09935 (orn)
Messenger RNA biogenesis [BR:
nex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NE857_09935 (orn)
Ribosome biogenesis [BR:
nex03009
]
Eukaryotic type
Pre-60S particles
RNases
NE857_09935 (orn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
USY21893
UniProt:
A0ABY5DFB9
LinkDB
All DBs
Position
complement(2196414..2197064)
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AA seq
216 aa
AA seq
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MNDSLVWIDCEMTGLDFENDALIEVACLITDGELNILDEGVDVVIKPPQKALDRMGDFVR
NMHTTSGLLEELDKGVTLEEAEDRVLEHIHQYVTEPRKAPLCGNSIATDRTFLARDMRRI
DDFLHYRMVDVSSIKELLRRWHPRVYYASPEKNGGHRALADITESIRELRYFRAAAFLPE
PGLSSSTARAIAAEVVADGTGFEARDAALAKSTPEN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacagtttggtgtggatcgactgcgagatgacaggcctcgacttcgagaacgac
gcactgatcgaggttgcctgtctgatcaccgacggcgagttgaacatcctcgacgagggt
gtggacgtcgtgatcaagcccccgcagaaggccctggaccggatgggcgacttcgtccgg
aacatgcacaccacctcggggctcctggaggagctcgacaagggcgtgaccctcgaagaa
gcagaggaccgcgtcctggagcacatccaccagtacgtcaccgagccccgcaaggcgccc
ctgtgcggcaactcgatcgccacggaccgcaccttcctcgcccgcgacatgcggcgcatc
gacgatttcctgcactaccggatggtcgatgtctcctccatcaaggagctcctgcgccgc
tggcacccgcgcgtctactacgcgagcccggagaagaacggcggccaccgcgccctcgcc
gacatcaccgaaagcatccgtgagctgcgctacttccgcgctgccgccttcctcccggaa
cccggcctgagctcgtccacggcccgcgccatcgccgccgaagtagtcgccgacggcacc
ggcttcgaggcacgtgacgcggctctcgcaaagtccaccccggaaaactga
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