Nocardiopsis exhalans: NE857_10330
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Entry
NE857_10330 CDS
T08285
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
nex
Nocardiopsis exhalans
Brite
KEGG Orthology (KO) [BR:
nex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nex03009
]
NE857_10330 (rimO)
Enzymes [BR:
nex01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NE857_10330 (rimO)
Ribosome biogenesis [BR:
nex03009
]
Prokaryotic type
ribosomal protein modification factors
NE857_10330 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
USY21965
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All DBs
Position
2296788..2298236
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AA seq
482 aa
AA seq
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MSSRRTVSLVTLGCARNEVDSEELAGRLAAGGWDLVDGDTKADVTVVNTCGFIDAAKQDS
IETLLEAAEGGGKVIAAGCMAERYGSELADALPEANVIGFDDYAAITDRLDDVVSGRALV
PHDPRDRRTLLPISPAERDASQVHVPGHASFADSEGADGTELPYRAATPRRRLTGGPVAN
LKIASGCDRRCTFCAIPAFRGAYISRQPDEIVREAEWLASEGVREVFLVSENSTSYGKDL
GDVRALEKLLPRLAAVEGLERVRVSYLQPAEVRPGLVEVLTSTPGVVPYFDLSFQHASGP
LLRRMRRFGDRERFLELLETARKAAPEAGARSNFIVGFPGETEEEFQELVSFLSEARLDA
IGVFGYSDEDGTEALTHENKVPEEVVAERVDTLNRLTEELMVQRAEERIGSEVTVLVETV
LEDGAYEGRAEHQAPEVDGSTILYGENLAVGDLVRATVIQSMGADLVAEQDVAEQDGEAG
DR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgcgacgtactgtctcactcgtcaccctggggtgtgcgcgtaacgaggtcgac
tccgaagagctcgccgggcgccttgccgctggcggctgggacctcgtcgacggagacacc
aaggccgacgtgaccgtcgtcaacacctgcgggttcatcgacgccgccaaacaggactcc
atcgagaccctgctggaggcggccgagggcggtgggaaggtcatcgccgcgggctgcatg
gccgagcgctacggctccgaactcgccgacgccctccccgaggccaacgtcatcgggttc
gacgactacgccgccatcaccgaccggctcgacgacgtcgtctccgggcgcgccctggtc
ccgcacgacccgcgcgaccgccgcaccctgctgccgatcagcccggccgagcgcgacgcc
tcccaggtccacgtgcccgggcacgcctcgttcgcggactccgagggcgccgacggcacc
gagctgccctaccgggccgcgaccccgcgccgccgcctgaccggcggccccgtcgccaac
ctcaagatcgcctccggctgcgacagacggtgcaccttctgcgccatcccggccttccgc
ggcgcgtacatctcccgccagcccgacgagatcgtccgcgaggccgagtggctggccagc
gagggcgtgcgcgaggtcttcctggtcagcgagaactccacgtcctacggcaaggacctg
ggcgacgtgcgcgcgctggagaagctgctgccgcgcctggccgccgtcgagggcctggag
cgcgtccgggtcagctacctgcagcccgccgaagtccgccccgggctggtggaggtgctc
accagcacccccggtgtggtgccctacttcgacctctccttccagcacgccagcggcccg
ctgctgcgccgcatgcgccggttcggcgaccgcgagcgcttcctggagctgctggagacc
gcccgcaaggccgccccggaggccggggcccgctccaacttcatcgtgggcttccccggc
gagaccgaggaggagttccaggagctggtctccttcctcagtgaggcccgtctggacgcc
atcggtgtcttcggctactccgacgaggacggcaccgaggcgctcacgcacgagaacaag
gtgcccgaggaggtcgtggccgagcgggtggacacgctcaaccgcctgaccgaggagctc
atggtccagcgggccgaggagcgcatcggcagcgaggtgaccgtcctggtcgagacggtc
ctggaggacggcgcgtacgagggccgcgccgagcaccaagcgcccgaggtggacggcagc
accatcctgtacggcgagaacctcgccgtcggcgacctggtgcgggccaccgtcatccag
tcgatgggcgccgacctcgtcgccgaacaggacgtcgcggagcaggacggggaagccggc
gacagatga
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