Nocardiopsis exhalans: NE857_11295
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Entry
NE857_11295 CDS
T08285
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
nex
Nocardiopsis exhalans
Pathway
nex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NE857_11295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nex03400
]
NE857_11295
Enzymes [BR:
nex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NE857_11295
DNA repair and recombination proteins [BR:
nex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NE857_11295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Caud_bapl16_4th
Motif
Other DBs
NCBI-ProteinID:
USY22135
UniProt:
A0ABY5DFL8
LinkDB
All DBs
Position
complement(2522600..2524807)
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AA seq
735 aa
AA seq
DB search
MTAQPGPPDEVLFDLPRQEQKKETAKEKADTAKKTAKSRRPAKRRPADRLPVARVIVDTP
LPHLDRYFDYRVPADMDETAVPGCRVKVRFNGRLLAGFLAERVESSEFAGRLAYLETVVS
PEPVLTPEILALSRAVADRYAGTLSDVLRLAVPPRHARVEKETAREEQARAEDVEGVEPA
DEDPPEAPEHPEVAPSPDDDAPVQDTVEAAVLEVDPGPWDAYPEGPDFIEALHGGVPARA
VWNALPGTEWPDALAVAAEATLGAGRGTVVVLPDGRDVAAVDAALTRRLGEGRHVALTAD
LGPAKRYRSWLSVLRGQVQVVVGTRAAVFAPVRDLGLVALWDDGDDVHVDPHAPYPHART
VLAMRAHKADAAALIGGHTRTTDAQLLVESGWARPLVSDRATLRSRAPQIRPAGDDRELA
RDGAARSARIPSLALRAAREGAKSGPVLFQVPRRGYLNTLACAGCREPARCDACHGPLAV
RGSHAMPSCGWCGRVAGQWACPECGVSRMRAVVVGARRTAEELGRAFPSLTVRTSGREEV
LSEVANKPSLVVATPGAEPVVAGGGFAAAVLLDGWALLNRADLRASEETLRRWLNASALV
RPGGAVVVSADASLPVVQSLVRWDPGGFAERELAERRELGFPPAVSMASITGAPEHLREL
LDQIELPERAELLGPVPVGSERTESGTNKTERALLRVPRGAVGELTRALKTAASARSARR
DEHLAQVRVDPLHVL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgcagcccggcccgcccgacgaggtcctcttcgacctgcctcggcaggagcag
aagaaggaaacggcgaaggagaaggccgacaccgcgaagaagaccgcgaagagccgtcga
ccggccaagcgcaggcccgccgaccggctccccgtcgcgcgcgtcatcgtggacaccccg
ttgccgcacctggaccgctacttcgactaccgggtcccggccgacatggacgagaccgcc
gtgcctggctgccgggtgaaggtgcgcttcaacggccgtctgctggcgggtttcctcgcc
gagcgggtggagagctcggagttcgccggacggctggcctacctggagacggtggtctcc
cccgaacccgtgctcacccccgagatcctggcgctgtccagggcggtggccgaccgctac
gcgggcaccctgagcgacgtcctgaggctggcggtgccgccccggcacgcgcgggtggag
aaagagaccgcgcgcgaggagcaggcccgggccgaagacgtcgaaggggtggaacccgcc
gacgaggacccgcccgaggcccccgagcaccccgaggtggcgccctcccccgacgacgac
gccccggtgcaggacaccgtggaggcggcggtgctggaggtggaccccggcccctgggac
gcctaccccgagggccccgacttcatcgaggcgctgcacggcggggtaccggcccgcgcg
gtgtggaacgccctgcccggcacggagtggcccgacgccctcgccgtggccgccgaggcc
accctgggcgcggggcgcggcaccgtggtggtgctgccggacgggcgcgacgtggccgcg
gtggacgccgcgctcacccgccgtctgggcgagggccgccacgtggcgctcaccgccgac
ctgggtccggccaagcgctaccggagctggctctcggtgctgcgcggacaggtccaggtg
gtggtgggcacccgggccgcggtcttcgcgcccgtgcgcgacctggggttggtggccctg
tgggacgacggcgacgacgtgcacgtggacccgcacgccccctacccgcacgcgcgcacg
gtactggcgatgcgcgcgcacaaggccgacgcggcggcgctgatcggcgggcacacccgc
accaccgacgcccagctgctggtggagtccgggtgggcgcgcccgctggtctccgaccgg
gccacactgcgcagccgggccccgcagatccggcccgccggcgacgaccgcgaactcgcc
cgggacggcgcggcccggtccgcgcggatcccgagcctggcgctgcgcgcggcccgtgag
ggcgccaagagcggcccggtgctgttccaggtgccgcgccggggctacctcaacacactg
gcctgtgcgggctgccgcgaaccggcgcgctgcgacgcctgccacgggccgctggccgtg
cgcggttcccacgccatgccctcgtgcggctggtgcggccgggtggccggtcagtgggcc
tgccccgagtgcggggtgagccggatgcgcgcggtggtggtgggcgcccgccgcaccgcc
gaggagctgggccgggccttcccgtcgctgaccgtgcgcacgtcggggcgcgaggaggtg
ctctccgaggttgcgaacaaaccgtcgctggtggtggccacgcccggcgccgaaccggtg
gtcgccggtggcgggttcgccgcggcggtcctgctggacgggtgggcactgctcaaccgg
gccgacctgcgcgcctcggaggagaccctgcggcgctggctgaacgcgtccgcgctggtg
cggccgggcggcgcggtggtggtgtccgcggacgcctcgctgccggtggtgcagtcgctg
gtgcggtgggatccgggcggtttcgccgagcgggaactggccgagcgccgcgagctcggg
tttccaccggcggtgtcgatggcctcgatcaccggcgcccccgagcacctgcgcgagctg
ctggaccagatcgaactcccggagagggcggagctgctcggcccggtgccggtgggttcg
gagcgcaccgagagcggcaccaacaagaccgagcgcgccctgctgcgggtgccgcgcggg
gcggtcggcgagctcacccgggcgctgaagaccgcggcgtcggcccgcagcgcccgccgc
gacgagcatctcgcccaggtccgggtggacccgctgcacgtgctctag
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