Nocardiopsis exhalans: NE857_11495
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Entry
NE857_11495 CDS
T08285
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
nex
Nocardiopsis exhalans
Pathway
nex00470
D-Amino acid metabolism
nex00550
Peptidoglycan biosynthesis
nex01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nex00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NE857_11495 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NE857_11495 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nex01011
]
NE857_11495 (murD)
Enzymes [BR:
nex01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
NE857_11495 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
nex01011
]
Precursor biosynthesis
Amino acid ligase
NE857_11495 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
Mur_ligase
NAD_binding_2
Shikimate_DH
TrkA_N
Peripla_BP_4
AdoHcyase_NAD
MurD_N
Motif
Other DBs
NCBI-ProteinID:
USY22170
UniProt:
A0ABY5DE03
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Position
2568193..2569662
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AA seq
489 aa
AA seq
DB search
MPHHHPSDTSQTPAPAGKDNPFAGARVCVAGLGVSGPPVARALLARGARVVVVDGRDDDT
TRPVAAALTEAGAEVVLGDTPLPEDCDLVVTSPGWRPDSPLLARAADAGIEVIGDVELAW
RIKPADQVWLAITGTNGKTTTVRMLESILRADGRDALAVGNVGTPVVDAVQPDSDGHVHD
ILAVELSSFQLHWSNSLRPHAATVLNVAPDHLDWHGGLDPYARAKGRVFARGTIRVVNTA
DAWSVRLAEEDGDPHTPVVGLRLDTPRTGELGVVEDLLVDRAFVAEPHSSAEELATLGDV
RPAAPHNVANALAAAALARSVGVAPASIKAGLAAFVPEPHRIAHVASVAGVDYVDDSKAT
NPHAAAASLNSYASVVWIAGGLLKGAEVDDLVSGAASRLRAAVLIGADRERIREALAKHA
PHVPVVEVEGPEPGAPAGHTVMDAVLARAAALAEEGDTVLLAPAAASMDMFTNYPERGRF
FAEAVHRLR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaccaccatccttccgacacctcccagacccccgcgcccgcggggaaagacaac
cccttcgcgggcgcgcgggtctgcgtcgccggtctgggtgtctccgggccccccgtcgcc
agggcactcctggcccggggagcccgggtggtcgtcgtcgacggccgtgacgacgacacc
acccgcccggtggccgccgccctgaccgaggccggagccgaggtcgtcctgggcgacacc
ccgctgcccgaggactgcgacctcgtggtcacctcgcccggctggcgccccgactcccca
ctcctggcccgcgccgccgacgccggtatcgaggtcatcggggacgtggagctggcctgg
cggatcaagcccgccgaccaggtgtggctcgccatcaccggcaccaacggcaagaccacc
accgtgcgcatgctggagtccatcctgcgcgcggacggccgcgacgccctcgccgtcggc
aacgtgggcacccccgtcgtggacgccgtgcagcccgactccgacggccacgtccacgac
atcctcgccgtggagctgtccagcttccagctgcactggtccaacagcctgcgcccgcac
gccgccaccgtcctcaacgtggcccccgaccacctggactggcacggcgggctcgacccc
tacgcccgcgccaagggcagggtgttcgcccgaggcaccatccgcgtggtcaacaccgcg
gacgcctggtccgtccgcctggccgaggaggacggcgacccgcacacccccgtggtgggg
ctgcgcctggacacgccccgcaccggtgagctcggtgtggtcgaggacctactggtggac
cgtgccttcgttgccgaaccgcacagcagcgccgaggaactggcgaccctgggcgacgtg
cgcccggccgccccgcacaacgtcgccaacgccctggccgccgccgccctggcccgctcg
gtgggggtcgccccggcctcgatcaaggccggtctggccgccttcgtgcccgaaccccac
cgcatcgcgcacgtggcctcggtcgcgggcgtggactacgtggacgactccaaggccacg
aacccgcacgccgccgcggcctccctgaactcctacgcctccgtggtgtggatcgcgggc
ggtctgctcaagggcgccgaggtcgacgacctggtctccggtgccgcgagccgcctgcgc
gcggcggtgctgatcggcgccgaccgcgagcgcatccgcgaggccctggccaagcacgcc
ccccacgtcccggtggtggaggtggagggccccgagcccggcgccccggccgggcacacg
gtgatggacgccgtcctcgcccgggccgccgccctggccgaggagggcgacaccgtgctg
ctggccccggccgccgcctccatggacatgttcaccaactacccggagcgcggccgcttc
ttcgccgaagccgtgcaccggctgcgttag
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