Nocardiopsis exhalans: NE857_13150
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Entry
NE857_13150 CDS
T08285
Name
(GenBank) DEAD/DEAH box helicase
Organism
nex
Nocardiopsis exhalans
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
Maf_N
Motif
Other DBs
NCBI-ProteinID:
USY22468
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Position
2953717..2956977
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AA seq
1086 aa
AA seq
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MECVRVIEAFWESDRLRVWAVDSDLPAATPSRKRIRPHPYALGTETLAEVLADLGACSGI
PDHEVLNLPGVPRHPVPPPCFPAMADAPRYSPGQVTVRPWLVPTLDLAGPDASALLRRAR
RDPATADLTADPIAGPTGTRFGASLTGLALLLDAATSLADTGRLIPRLLETPVDGPRAGA
PAPQARWRPLLDPATLAWLRDHVRALPPVARAAHTPDLAPEEAGADAMADALGALCSFTD
LVARERLAHHRAEVPERPRVQHQWLAALTAANGDLPRRVRNQLSESSQLIHEIQDWFTAT
HQYAGAIRLVFRLVEPAPDPATAQEPAGEETVEEWPTGSSEADPEALGTEPQDGLHIPAG
LPWRLQIWVQSVEEPSLMVPLDDLREGEGADWLPRDPAEPIDRALTQAARACPVLVRGLA
PEAPGCLELTPEEAFDVLSRHAEALREAGFGVLLPPWLGEIGVGTRLTLSAHTGPGPHQA
EGGTGIGRTLVDFDYRAAVGDLDLGPEEIAELARLKRPLVRLRGEWARLDPEQLRRVAAY
LADGASGTVQVGEAVRMALLPDPAGPELEGVDADGELGALLAGQAEHAFTPMTEPEGLDA
ELRPYQRRGAGWLRYLDRLGLGAVLADDMGLGKTVQLLALLADERTGSRAAQRRPAPTLL
VCPTSVLGNWCREAERFTPKLRVLLHHGPARPRGEDLDRQVPESDLVLTSYGVMARDAEA
LAGLPWARVVCDEAQNIKNSRTKQAGAVRTIPAASRVALTGTPVENHLGELWSILDFANP
GLLGSRETFEKGVAARVHRDLGKDSGQNSGQSAAALRRVTAPFILRRLKTDTSIITDLPA
KNEMRTWCTLTKEQASLYRATVDEMTARIDEATGMRRKSLVLATMTKLKQVCNHPAHLLG
DGSRLNGRSGKLARLEELLAEMAAEGDKALCFTQYTEFGHRLAPYLEGKLDMPVLWLHGG
TSRKKREELVDRFQNSDQPALFLLSLKAAGTGLNLTAANQVVHFDRWWNPAVEDQATDRA
FRIGQKRNVQVRKMVCVGTLEERVDEMIERKKSLAEAVVGQGENALTDLSVDELREVVRL
APEAVA
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtgtgcgtgtcatagaagctttctgggaatcggaccggctccgagtctgggcg
gtcgattccgacctgcccgccgccaccccttctcggaagcggatccgcccccacccctac
gcgctgggcacggagacgctggctgaggtgctggccgacctcggcgcgtgctccgggatc
ccggaccacgaagtcctgaaccttcccggtgtgccccgccacccggtcccgccgccgtgc
ttccccgccatggccgacgcaccgcggtactcgcccggtcaggtgaccgtccgcccctgg
ctggtgcccacactcgacctggccgggccggacgcgtcggccctgctccgccgcgcccga
cgcgatccggccaccgccgacctcacagccgaccccattgcaggccccaccggcacccgc
ttcggtgcctccctcaccggcctggccctcctcctggacgcggccacatccctggccgac
accggccgcctcattccacgcctgctggaaaccccggtcgacggaccacgggccggcgcc
cccgcgccacaggcccggtggcgccccctcctggaccccgccaccctcgcctggctgcgc
gaccacgtccgcgccctcccgccggtggcccgcgccgcgcacacccccgacctcgccccc
gaggaagcgggcgccgacgccatggccgacgccctgggcgccctgtgttcgttcaccgac
ctcgtggccagggaacggctggcccaccaccgcgccgaggtacccgaacgcccccgcgtc
cagcaccagtggttggcggccctcaccgccgccaacggcgacctgccccgcagggttcga
aaccagctgtccgaaagcagccagctcatacacgagatccaggactggttcaccgccacc
caccagtacgcgggcgcgatccgtctggtcttccggctggtcgagcccgcccctgacccg
gccaccgcgcaggaaccggccggggaggagacggtagaggagtggccgaccggatccagc
gaagccgatcccgaagccctcggaacagaaccccaggacgggctgcacatccccgcgggc
ctgccctggcggttgcagatctgggtccagtccgtcgaggagccctccctcatggtgccc
ctggacgacctgcgtgagggcgagggcgcggactggctgccccgggaccccgccgaaccc
atcgaccgcgcgctcacccaggccgcccgcgcctgcccggtactggtccgcggcctggcc
cccgaggcccccggctgcctggaactgaccccggaggaggccttcgacgtcctgtcccgg
cacgccgaggcgctccgagaggccggattcggagtgctcctgccgccctggctcggtgag
atcggggtgggcaccaggctcacactctccgcccacaccggccccggaccgcaccaggcc
gaaggcgggaccgggatcggccgcaccttggtcgacttcgactaccgggccgccgtcggc
gacctcgacctggggcccgaggagatcgccgaactggcccgcctgaagcgccccctcgtc
cggttgcgcggagagtgggcccggcttgaccccgaacagctccgccgggtcgccgcctac
ctggccgacggtgccagcggaaccgtccaggtgggggaggcggtgcggatggcactgctc
cccgaccccgcgggccccgaactggagggggtcgacgccgacggggaactgggggcgctg
ctggcgggacaggccgagcacgccttcacccccatgaccgaacccgaagggctggacgcc
gaactgcgcccctaccagcggcgcggcgcgggatggctgcgctacctggaccggctcggc
ctgggcgcggtcctcgccgacgacatgggtctgggcaagaccgtgcagctgctcgccctg
ctggccgacgaacgcaccggctcccgtgcggcccagcggcggccggcgcccacgctcctg
gtgtgcccgacttcggtcctgggcaactggtgccgggaagcggaacggttcacgccgaaa
ctgcgcgtcctcctccaccacggccccgcccggccccggggtgaggacctggaccgtcag
gtgccggagtcggacctggtcctgaccagctacggggtgatggcccgcgacgccgaagcg
ctcgccggactgccctgggcccgggtggtctgcgacgaggcccagaacatcaagaactcc
cggaccaaacaggccggggcggtgcgcaccatcccggccgcctcccgggtcgccctgacc
ggtacccccgtggagaaccacctgggtgagctctggtcgatcctggacttcgccaacccc
ggcctgctgggctcacgcgagaccttcgagaagggggtggccgcgcgcgtccaccgcgac
ctcggcaaggactccggtcagaactccggccagtccgcggcggcgctgcgccgcgtcacc
gcgcccttcatcctgcgccgcctcaagaccgacacctcgatcatcaccgacctgcccgcc
aagaacgagatgcggacctggtgcaccctcaccaaggaacaggcctccctgtaccgggcc
accgtcgacgaaatgacagcccggatcgacgaggccaccgggatgcggcgcaagagcctg
gtgctggcgaccatgaccaagctcaaacaggtctgcaaccacccggcccacctgctcggc
gacggctcccgcctgaacgggcgctcgggcaaactggcccggctcgaagaactgctcgcc
gagatggccgccgagggcgacaaggcgctctgcttcacccagtacaccgagttcggccac
cggctcgccccctacctcgaaggcaaactggacatgccggtgctgtggctgcacggcggg
acctcccgtaagaagcgcgaggagctggtcgaccggttccagaacagcgaccagcccgca
ctgttcctgctctccctcaaggcggcgggcaccggactcaacctcaccgccgccaaccag
gtcgtccacttcgaccgctggtggaacccggccgtggaggaccaggccaccgaccgggcc
ttccgcatcggccagaaacgcaacgtgcaggtacgcaagatggtgtgcgtgggcaccctg
gaggaacgcgtggacgagatgatcgaacgcaagaagagcctggccgaggccgtggtcggc
cagggagagaacgccctgaccgacctcagcgtcgacgaactgcgcgaggttgttcgcctg
gccccagaagcggtggcctga
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