Nocardiopsis exhalans: NE857_20380
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Entry
NE857_20380 CDS
T08285
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
nex
Nocardiopsis exhalans
Brite
KEGG Orthology (KO) [BR:
nex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nex03016
]
NE857_20380
Enzymes [BR:
nex01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
NE857_20380
Transfer RNA biogenesis [BR:
nex03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NE857_20380
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Major_capside
Motif
Other DBs
NCBI-ProteinID:
USY23359
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All DBs
Position
4621728..4622978
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AA seq
416 aa
AA seq
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MNSKTEPREPDNDDAERAPLLREPREGLPEVTADADALAGVIAALSAGSGPVAVDAERAS
GYRYGQRAYLVQLRREGAGSALIDPIACPDLSDLNSAVDGAEVVLHAAHQDLPCLSEVNL
RPSLLFDTELAGRLLGYQRVGLGFMVERLLDVRLAKEHSAVDWSQRPLPEDWLRYAALDV
EILIELRDSLETELTETGKLEWAQEEFSSVLAAPPKEPRADPWRRTSGIHKVRNQRALAA
VRELWYERDRIAQERDISPGRVLPDAAIVEAATAMPRSTTELAKIRQYGIKLARRYLTTW
IKAVNRARDMAQAELPRPNAPGDGPPPVNRWADRAPEAARRLEAARATVTGIAEDVVMPT
ENLLLPDTVRRLAWVPPKTVDPDSVGDFLRTRGARNWQVGLTAEPLATALRDAEKS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
ttgaactccaagacagaaccccgcgaaccagacaacgacgacgcggagagggcgcctcta
cttcgggaaccacgcgagggcctgcctgaggtcaccgcggacgccgacgccctcgccggt
gtcatcgcggccctgagcgccggctcgggccccgtcgccgtggacgccgagcgcgcctcg
ggctatcggtacgggcagcgcgcgtacctggtgcagctgcggcgggagggtgccggatcg
gcgctgatcgacccgatcgcctgccccgacctgagcgacctcaactccgcggtcgacgga
gccgaggtggtgctgcacgccgcgcaccaggacctgccgtgcctgtccgaggtcaacctg
cgcccgtccctgctgttcgacaccgagctcgccggacggctgctgggctaccagcgggtc
gggctcggattcatggtggagcggctgctggacgtgcgcctggccaaggagcactcggcg
gtggactggtcgcagcggccgctgcccgaggactggctgcggtacgcggcgctggacgtg
gagatcctcatcgagctgcgcgactccctggagaccgagctcaccgagaccggcaagctg
gagtgggcccaggaggagttctcctccgtgctggccgccccgcccaaggagccgcgcgcc
gatccctggcggcgcacctcgggcatccacaaggtccgcaaccagcgcgccctggccgcc
gtccgcgagctctggtacgagcgcgaccgcatcgcccaggaacgggatatctccccgggc
cgggtgctgccggacgcggcgatcgtggaggcggcgacggcgatgccgcgcagcaccacg
gagctggccaagatccggcagtacgggatcaaactggcccgccgttacctgaccacgtgg
atcaaggcggtgaaccgggcccgtgacatggcccaggccgagctgccgcggcccaacgca
cccggagacgggccgcccccggtcaaccgctgggccgaccgcgcccccgaggcggcgcgc
cggctggaggccgcccgggcgacggtgacgggtatcgcggaggacgtcgtgatgccgacc
gagaaccttctgctgccggacaccgtcagaaggttggcgtgggtgcccccgaagaccgtg
gacccggattccgtgggcgatttcctacgcacgcgtggcgcacggaactggcaggtcggg
ttgaccgcggaaccgctggccacagccctgcgggacgcggaaaaaagctga
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