Nocardiopsis exhalans: NE857_21955
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Entry
NE857_21955 CDS
T08285
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nex
Nocardiopsis exhalans
Pathway
nex03030
DNA replication
nex03430
Mismatch repair
nex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NE857_21955
03430 Mismatch repair
NE857_21955
03440 Homologous recombination
NE857_21955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nex03032
]
NE857_21955
03400 DNA repair and recombination proteins [BR:
nex03400
]
NE857_21955
Enzymes [BR:
nex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NE857_21955
DNA replication proteins [BR:
nex03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NE857_21955
DNA repair and recombination proteins [BR:
nex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NE857_21955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
USY17983
UniProt:
A0ABY5D4F7
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All DBs
Position
complement(4964605..4965222)
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AA seq
205 aa
AA seq
DB search
MVLDFEATTPAGHPPQPIEVAALALHYAAGRWREVGRSTSLIRPPAFAPVTAATTALNGL
TPQQLATAPPPDQALAVLDQRFTTGARYLLVAHHAATEANLIYHQREHCPTLAHINLIDT
IPLAKHLVPGLDNYRLDTLLAHFAIPRPADRHRAYADVEVTAQVFMRLIDAADRDGALED
LAGLVTIAGRTAKANRPTQQELFEL
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
gtggtcctggacttcgaggcgactaccccggcaggccacccgcctcagcccatcgaagtg
gccgctttggcgctgcactacgctgccgggcgctggagggaggtcggccgcagcacttcc
ctcattcgcccgcccgccttcgccccggtgacggccgccaccacggccctgaacggcctg
accccccaacagctcgcgacggcgccgccccccgaccaagcgctggcggtactggaccag
cgcttcaccacaggcgcccggtatctgctggtggcccatcacgccgccaccgaagccaac
ctcatctaccaccagcgcgagcactgcccgaccctggcccacatcaatctgatcgacacc
atcccgctcgccaagcacctcgttcctggcctggacaactacaggctcgacacgctgctg
gcccacttcgcgattccccgccccgcggaccgccaccgggcctacgccgacgtcgaggtc
accgcccaggtgtttatgcggctcatcgacgccgccgaccgcgacggagccctcgaagac
ctcgctgggctggtcacgatcgccggacgcaccgccaaagccaaccggcccacacagcaa
gaactcttcgaactgtga
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