Nocardiopsis exhalans: NE857_24950
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Entry
NE857_24950 CDS
T08285
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
nex
Nocardiopsis exhalans
Brite
KEGG Orthology (KO) [BR:
nex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nex03032
]
NE857_24950
03400 DNA repair and recombination proteins [BR:
nex03400
]
NE857_24950
Enzymes [BR:
nex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NE857_24950
DNA replication proteins [BR:
nex03032
]
Prokaryotic type
DNA Topoisomerases
NE857_24950
DNA repair and recombination proteins [BR:
nex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NE857_24950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DegS
Lzipper-MIP1
Motif
Other DBs
NCBI-ProteinID:
USY18526
LinkDB
All DBs
Position
5645512..5648007
Genome browser
AA seq
831 aa
AA seq
DB search
MARTTSRPPEDLAEKIIDIDVSEEMRGSFLEYAYSVIYQRALPDARDGMKPVQRRILYQM
NEMGLRPDRGHVKCARVVGEVMGRLHPHGDSAIYDALVRLSQSFAMRVPLVDGHGNFGSL
GGDDAPAAMRYTEARLDSAAELLVSSIEEDVVDFKPNYDGQETEPEVLPAAFPNLLVNGA
SGIAVGMATNMAPHNLGEVIAAARHLIANPEATLEELTEFVPGPDLPTGGSIVGLDGIRD
AYRKGRGTFKTRATVAIEKVSARRTGLVITELPYSVGPEKVISRIKELVQSKKLQGISDL
KDLTDRNQGLRLVIELKNGFNPEAVLEELYRLTPMEETFGINNVALVDGQPQTLGLRELL
EVYVNHRLEVVRRRSEHRRKKRQERLHLVAGLLVALLDIDRVIALIREADDTAMARESLM
GAYELSEIQARYILDTPLRRLTRFDRLELETERDKLNQEIEELTSILESDKKLRRVVSKE
LNDVSKKFATPRRTQLREADGAARAAVIPLEMADQPCHVLLGVDGRIARTKGATPPRVYA
GLRAPHDAIEVSIPTTSRSDIGFVTDLGRMIRVPVVELPELPEDGEGEPERPPLASGLDV
GEFVQLDEGERVVSVVSMNATGPGFAVGTVGGVVKRVAPDFPPNKDDFEIITLKDEDRVI
GVTQLSTGEEDLVFVTSEAQLLRFSAATTRPQGRQAGGVAGVRLSDEARVLWFGAVSSPE
DSIVVTVSGSSSALEGTQSGSAKVTPFAAYPSKGRATGGVRCHRYLKGEDTLLFAWVGRA
PARASRADGKQVRLPDLTERRDGSGEALTSPIATVGSGQTDSGITAPGPGA
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtactacttcccgtccccccgaggatctcgccgagaagatcatcgacatcgac
gtctccgaggagatgcgcggcagcttcctggagtacgcgtactcggtgatctaccaacgc
gcgctgcccgacgcgcgtgacggtatgaaaccggtccaacggcgcatcctctaccagatg
aacgagatgggcctgcggcccgaccgcgggcacgtcaagtgcgcccgtgtcgtcggggag
gtgatgggtcggctccacccccacggcgactccgccatctacgacgccctggtgcggctg
agccagtccttcgccatgcgcgtgcccctggtcgacggccacggcaacttcggttcgctg
ggcggcgacgacgcgcccgcggccatgcgctacaccgaggcccgtctggacagcgccgcc
gagctgctcgtgtcctccatcgaagaggacgtcgtcgatttcaagcccaactacgacggc
caggagaccgaacccgaggtccttcccgcggccttccccaacctcctggtcaacggcgcc
tccggcatcgccgtgggcatggccaccaacatggccccgcacaacctgggcgaggtcatc
gcggccgcccgccacctgatcgccaaccccgaggccaccctggaggagctcaccgagttc
gtccccggccccgacctgcccaccggcggcagcatcgtcggcctcgacggcatccgcgac
gcctaccgcaagggccgcggcaccttcaagacccgcgccaccgtcgccatcgagaaggtc
tccgcgcgccgcaccggcctggtcatcaccgagctgccctacagcgtcggccccgagaag
gtcatcagccgcatcaaggagctggtgcagtccaagaagctccagggcatctcggacctg
aaggacctgaccgaccgcaaccagggcctgcgcctggtcatcgagctcaagaacggcttc
aaccccgaggcggtcctggaggagctctaccggctcacgccgatggaggagaccttcggc
atcaacaacgtggccctggtcgacggccaaccgcagaccctgggcctgcgcgaactgctc
gaggtctacgtcaaccaccgcctcgaggtggtccgccgccgcagcgagcaccgccgcaag
aagcgccaggagcgcctgcacctggtcgccgggctgctcgtcgctctgctcgacatcgac
cgcgtcatcgcgctcatccgcgaggccgacgacaccgccatggcccgtgagtccctcatg
ggcgcctacgagctgtccgagatccaggcgcgctacatcctcgacaccccgctgcgccgg
ctgacccgcttcgaccggctggagctggagaccgagcgggacaagctcaaccaggagatc
gaggagctcacctccatcctggagtcggacaagaagctgcgccgggtggtctccaaggag
ctcaacgacgtctccaagaagttcgccaccccgcgccgcacccagctgcgcgaggccgac
ggcgcggcccgcgccgcggtgatcccgctggagatggccgaccagccctgccacgtgctg
ctgggcgtggacggccgcatcgcccggaccaagggcgcgaccccgccgcgcgtgtacgcg
ggcctgcgcgccccgcacgacgcgatcgaggtttcgatcccgaccacctcccgctcggac
atcgggttcgtcaccgacctgggccggatgatccgcgtcccggtggtggagctgcccgaa
ctccccgaggacggcgagggcgagccggaacgcccgcccctggcctcggggttggacgtg
ggtgagttcgtccagctcgacgagggtgagcgcgtggtgtcggtggtgtccatgaacgcc
acgggccccggattcgccgtgggcaccgtgggcggtgtggtcaagcgcgtcgcaccggac
ttcccgcccaacaaggacgacttcgagatcatcacgctcaaggacgaggaccgggtgatc
ggcgtcacccagctgtccaccggcgaggaggacctggtattcgtcacctccgaggcgcag
ctgctgcgcttctcggccgccaccacccgcccgcagggccgccaggcgggcggtgtagcc
ggggtgcgcctgtccgacgaggcccgcgtgctgtggttcggcgcggtctccagccccgag
gactcgatcgtggtgaccgtctcgggcagcagcagcgccctggagggcacgcagtccgga
tcggccaaggtcaccccgttcgccgcctacccgtcaaagggccgggccaccggcggtgta
cgctgccaccgctacctgaagggcgaggacaccctgctgttcgcgtgggtgggacgcgcc
ccggcccgcgcttcgcgggccgacggcaagcaggtccggctgccggacctgaccgagcgc
agggacggctcgggggaggctctgacgagtcccatcgccacggtcggtagcggccagacc
gactccgggatcaccgctcccgggccgggcgcctga
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