Nocardiopsis exhalans: NE857_28650
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Entry
NE857_28650 CDS
T08285
Name
(GenBank) ATP-dependent helicase
Organism
nex
Nocardiopsis exhalans
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
PDDEXK_1
AAA_19
UvrD_C
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_22
AAA_16
DEAD
Motif
Other DBs
NCBI-ProteinID:
USY23463
LinkDB
All DBs
Position
complement(6462190..6465354)
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AA seq
1054 aa
AA seq
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MRRAHQVQPPPVLDENQQRVVDHPGGPLLVLAGPGTGKTTTIVEAVVDRIDNRGVDPSRI
LVLTFSRKAAQELRERITGRLRRTTREPLALTFHSYAYSLIRREFQRMGDLPPRLLSGPE
QLMEVRELLKWEFEDGAQAWPERLRPALETRGFAEELRDFLMRAQERGLGPQTLAGMAAE
RDRDDWTAAAGFLSRMNGRFDIAPVPTLNYAELVRVAANMLTDPEVQERERSAHEVVFVD
EYQDTDPAQEELLRALAGDGRDLIAVGDPDQSIYAFRGAEVHNILDFPSRFPTLERKDAP
VVALQTCRRSGSVLLAASRGLTRRLPAVSSARGQVNAHRALTPAEGVPDGEVHVLMADSA
TQEAAVIADTLRRAHLMDGVPWSDMAVLVRSSSRQLPVLRRALTAASVPVVVGSDDLPVA
AEPIVRPMLGLIRYGLRPEELDDDAARELLMSPFGEADTVRLRRLVRALRRLDLDRVREE
GEAGESAAGEAEPAGYRPSSQLLVDALRDPRELTLVDPAIAAPATRVAGALRTVRDLTAK
GSDAEQVLWELWRDSGLADRFLRASQAGGRRGAAADRDLDAVVALFESAARYCDRLPPGT
PDGFLDDLAAQEIPGDSLAERAPEGEAVRILTAHRSKGLEWGLVVVAGAQEGEWPDLRLR
GSLLGVEELVDAESHSADSFGAALASKLLDEERRLFYVALTRARRSLYVTCVGGEDTDER
PSRFLNEMGMGDPEPVSTGRRWLSLPALVADLRSVVTDPSAPGPLREAAAAHLARLAEEG
VRGADPAEWYALTPFTDDRPLSDPEDTIRVSPSQVESFTNCQLRWLLERAAGASSGDSAS
ALGTVVHAVAVLVAQGSSAEEVSSRMDEIWTDLDFGGPWQSDKQRDRADEMVRKFITWDA
TNDRELVVTEEGFKVDVGGIEITGRVDRLERDTEGRAVVVDLKTGGTKADDLARHPQLGV
YQMAVLKGAFAKLGLAEPGGAALVQVGKAALSKKAREQAQPPLGEDPDPGWAQTLVHEVA
TGMGGSRFAATRNTGCNSCAVRACCPVQDEGRHV
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
gtgcggcgcgcccaccaggtgcagccgcctccggtgctggacgagaaccagcagcgcgtg
gtcgatcacccgggcgggccgctcctcgtcctggcgggccccgggaccggcaagaccacc
accatcgtcgaggccgtcgtcgaccgcatcgacaaccgcggcgtggacccctcgcgcatc
ctggtgctcaccttcagccgaaaagccgcgcaggagctccgtgagcgcatcaccggccgc
ctgcgccgcaccacccgcgaacccttggcgctgaccttccacagttacgcctactccctc
atccgccgtgagttccagcggatgggcgacctgccgccccggctgctgtccggccccgag
cagctcatggaggtgcgcgagctgctgaagtgggagttcgaggacggcgcgcaggcctgg
cccgagcggctgcgtcccgccctggagacccgcggtttcgccgaggagctgcgcgacttc
ctcatgcgcgcccaggaacgcgggctcggcccgcagacgctggccgggatggccgccgaa
cgcgaccgcgacgactggaccgccgcggccgggttcctctcccggatgaacggccgcttc
gacatcgcccccgtgcccacgctcaactacgccgagctggtgcgggtggccgccaacatg
ctcaccgaccccgaggtgcaggagcgcgagcggtccgctcacgaggtggtgttcgtggac
gagtaccaggacaccgaccccgcccaggaggagctgctgcgcgccctggccggggacggc
cgcgacctcatcgcggtcggcgacccggaccagtccatctacgccttccgcggcgccgag
gtgcacaacatcctggacttccccagccggttccccaccctggagcgcaaggacgctccg
gtggtcgcgctgcagacctgtcgtcgcagcggttccgtcctgctggcggcctcgcgcggc
ctcacccgccgcctgcccgctgtgtcctccgcgcgcggccaggtcaacgcccaccgcgcc
ctcaccccggccgagggggtccccgacggcgaggtgcacgtcctgatggccgacagcgcc
acccaggaggccgcggtcatcgccgacaccctgcgccgcgcccacctgatggacggggtc
ccgtggtcggacatggcggtgctggtgcgctcctccagccgccagctcccggtcctgcgc
cgcgcgctcaccgccgcctcggtgccggtggtcgtgggctcggacgacctgccggtggcc
gccgaaccgatcgtccgtccgatgctcggcctgatccgctacggcctgcgccccgaggaa
ctggacgacgacgccgcccgcgagcttttgatgagcccgttcggcgaggccgacacggtg
cggttgcggcgtctggtgcgggcactgcgccgcctggatctggaccgggtcagggaagag
ggcgaagccggggaaagcgcagcaggggaagctgagcctgccgggtaccggccctcctcc
cagctgctcgtggacgcgctgcgcgacccccgggaactcaccctggtggaccccgccatc
gccgctcccgccacccgggtggcgggggccctgcgtaccgtccgcgacctcaccgccaag
ggatccgacgccgaacaggtcctctgggagctgtggcgcgacagcggtctggccgaccgc
ttcctgcgcgccagccaggccggaggccgccggggtgccgccgccgaccgcgacctcgac
gccgtggtcgcgctgttcgagagcgccgcccgctactgcgaccggctgccgcccggcacc
cccgacggcttcctcgacgatctggccgcccaggaaatccccggggacagcctcgccgaa
cgcgcgcccgagggcgaggcggtgcgcatcctcaccgcccaccgctccaagggcctggag
tgggggctggtcgtggtggccggggcccaggagggcgagtggccggacctgcgcctgcgc
ggttcgctgctcggcgtggaggagctggtggacgccgagagccactccgcggactccttc
ggtgcggccctggcctccaaactgctggacgaggagcgccgcctgttctacgtggcgctc
acccgcgcccgccgttccctctacgtgacctgtgtgggcggtgaggacaccgacgagcgg
ccttcgcgtttcctcaacgagatggggatgggcgacccggagccggtgagtaccggccgc
cgctggctctccctgcccgcgctcgtcgccgacctgcgctcggtggtcaccgacccttcc
gcgcccgggccgctgcgtgaggcggccgcagcccatctggcccgcctggccgaggaaggg
gtacggggggccgatccggcggagtggtacgcgctcaccccgttcaccgacgaccgcccg
ctctccgaccccgaggacaccatccgggtctcgccctcccaggtggagagcttcaccaac
tgtcagctgcgctggctgctggagcgcgccgccggggcctcttcgggcgactccgcctcc
gcgctcggcaccgtcgtgcacgcggtcgccgtcctggtcgcccagggcagcagcgcggag
gaggtcagctcccggatggacgagatctggaccgacctcgacttcggcgggccttggcag
tccgacaagcagcgcgaccgggcggacgagatggtccgcaagttcatcacctgggacgcc
accaacgaccgcgagctggtcgtcacggaggagggtttcaaggtggacgtgggcggcatc
gagatcaccggccgagtggaccgcctcgaacgcgacaccgagggccgcgccgtggtcgtg
gacctcaagaccggcggcaccaaggccgacgacctggcccgacacccccagctcggcgtc
taccagatggccgtgctcaagggtgcgttcgccaaactcggcctggccgaacccggcggc
gccgcgctggtccaggtcggcaaggccgcactcagcaagaaggcgcgcgaacaggctcag
cccccgctgggcgaggaccccgaccccggatgggcgcagaccctcgtgcacgaggtcgcc
accggcatgggcggatcccgcttcgccgccacccgcaacaccggatgcaactcgtgcgcc
gtacgcgcctgctgcccggttcaggacgagggccgacatgtctga
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