Nocardiopsis exhalans: NE857_29660
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Entry
NE857_29660 CDS
T08285
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nex
Nocardiopsis exhalans
Pathway
nex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NE857_29660 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nex03019
]
NE857_29660 (groL)
03110 Chaperones and folding catalysts [BR:
nex03110
]
NE857_29660 (groL)
03029 Mitochondrial biogenesis [BR:
nex03029
]
NE857_29660 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nex04147
]
NE857_29660 (groL)
Enzymes [BR:
nex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NE857_29660 (groL)
Messenger RNA biogenesis [BR:
nex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NE857_29660 (groL)
Chaperones and folding catalysts [BR:
nex03110
]
Heat shock proteins
HSP60 / Chaperonin
NE857_29660 (groL)
Mitochondrial biogenesis [BR:
nex03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NE857_29660 (groL)
Exosome [BR:
nex04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NE857_29660 (groL)
Exosomal proteins of other body fluids (saliva and urine)
NE857_29660 (groL)
Exosomal proteins of breast cancer cells
NE857_29660 (groL)
Exosomal proteins of colorectal cancer cells
NE857_29660 (groL)
Exosomal proteins of bladder cancer cells
NE857_29660 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
Motif
Other DBs
NCBI-ProteinID:
USY19369
UniProt:
A0ABY5D4S3
LinkDB
All DBs
Position
complement(6694720..6696324)
Genome browser
AA seq
534 aa
AA seq
DB search
MPKILEFEDDARRSLERGVNRLADAVKVTLGPRGRNVVIDKKFGAPTITNDGVTVAREIE
LDEPYENLGAQLVKEVATKTNDAAGDGTTTATVLAQALVREGIRSVAAGASPMSLKRGID
AAAAKVSEILLSRAVPVKEREDIAYVATNSAQDAQIGDLIAEAFDKVGKDGVITVEESPT
FGLDLDFTEGLQFDKGYISPYFVTDGDRQEAVLEDAQILISQGKIGNLNELLPLLEQIVQ
NKKPLLIIAEDVEGDALGALVLNKMRGTLNVAAVKAPGFGERRKAMLQDIAVLTGGQVIS
EEVGLTLENADLSALGSARRITITKDTTTVVDGGGEQSEVEDRVRQIRKEIEASDSDWDR
EKLQERLAKLAGGVSVLSVGAATEVELKEKKHRLEDAISATRAAIEEGIVAGGGASLVHA
STALDDLGMTGDEATGVSIVRRALVEPARWIAENAGAEGYVVTHRVSEMEVGHGFNAATG
AYGDLTAEGIIDPVKVSRSAVQNAASIAGMLLTTEVLVADKPEETEDDGHGHAH
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagatccttgagttcgaggacgacgcccgccgttccctcgagcggggcgtcaac
cgcctcgccgacgccgtgaaggtgacgttgggcccgcgcggccgcaatgtcgtcatcgac
aagaagttcggcgcccccaccatcacgaacgacggcgtgaccgtcgcccgtgagatcgag
ctggacgagccctacgagaacctgggcgcgcagctggtcaaggaggtcgccaccaagacc
aacgacgccgcgggtgacggcaccaccaccgccaccgtgctggcccaggcgctggtccgc
gagggcatccgcagcgtcgccgccggcgcgtccccgatgtccctcaagcggggcatcgac
gccgcggccgccaaggtctccgagatcctgctcagccgcgccgtgccggtcaaggagcgc
gaggacatcgcctacgtggcgaccaactccgcccaggacgcccagatcggcgacctgatc
gccgaggccttcgacaaggtcggcaaggacggcgtcatcacggtggaggagtccccgacc
ttcggtctggacctcgacttcaccgagggcctgcagttcgacaagggctacatctcgccc
tacttcgtcaccgacggggaccgtcaggaggccgtcctcgaggacgcccagatcctgatc
agccagggcaagatcggcaacctgaacgagctgctgccgctgctcgagcagatcgtgcag
aacaagaagccgctgctgatcatcgccgaggacgtcgagggcgacgccctgggcgcgctg
gtgctgaacaagatgcgtggcaccctcaacgtcgccgcggtcaaggcgcccggcttcggc
gagcgccgcaaggccatgctccaggacatcgccgtgctgaccggtggccaggtcatctcc
gaggaggtcggcctgaccctggagaacgcggacctgtccgcgctgggcagcgcccgccgc
atcaccatcaccaaggacaccaccaccgtcgtcgacggcggcggagagcagtccgaggtc
gaggaccgcgtccgccagatccgcaaggagatcgaggcgagcgactccgactgggaccgc
gagaagctccaggagcgcctggccaagctcgcgggcggcgtctcggtgctgagcgtgggc
gcggccaccgaggtcgagctcaaggagaagaagcaccgcctggaagacgccatctcggcg
acccgcgcggccatcgaggagggcatcgtcgccggcggcggcgcctccctggtgcacgct
tcgaccgccctggacgacctcggcatgaccggcgacgaggccaccggtgtctccatcgtg
cgccgcgcgctggtcgagccggcccggtggatcgcggagaacgcgggcgccgagggctac
gtggtcacgcaccgcgtctccgagatggaggtcggtcacggcttcaacgccgccaccggc
gcctacggtgacctgaccgccgagggcatcatcgacccggtcaaggtctcccgctcggcc
gttcagaacgccgcctccatcgcgggcatgctgctgaccaccgaggtgctggtcgcggac
aagcccgaggagaccgaggacgacggtcacggccacgcgcactag
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