Nocardiopsis exhalans: NE857_29985
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Entry
NE857_29985 CDS
T08285
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
nex
Nocardiopsis exhalans
Pathway
nex02024
Quorum sensing
nex03060
Protein export
nex03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
NE857_29985 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NE857_29985 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NE857_29985 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
nex02044
]
NE857_29985 (secD)
Secretion system [BR:
nex02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
NE857_29985 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF
SecD_1st
Sec_GG
MMPL
ACR_tran
DUF5693
Motif
Other DBs
NCBI-ProteinID:
USY19431
LinkDB
All DBs
Position
6765337..6767973
Genome browser
AA seq
878 aa
AA seq
DB search
MSSQTGAGARWTRALISLLVILVAFGAAWFIPPRLGLDLSGGTQIVLETQDGTDGTEANS
ENTDKVVEVLRQRIDRLGVAEATMSRSGENRIIVELPGVQDPAEAAQIVGQTAQLSFHPV
LGVGDPGGQGVQAPDFANPPADEARAPADGEDGAPAEGEGQLSPDELDMEALLEGMGGDQ
GMPQAPGGAPAENPADVAMTLPDDEGQMLQLGEAAIQGDRVSSADAALDSVNRASWVVNV
SFRGEGREQWRELTGEAACNPIGDPKRRVAIVLDGQIISSPQVTEETGCESGMAGGQTTI
SGANFTSESANELAVLIEGGSLPLPVTEVQRQTVGPTLGAAAIQASAIAAVLGIAFTALY
ITLVYRLVGFLASIALAFYTLIAYGALVALGATLTLPGLAGFVLAIGMAIDANVLIFERA
REEYQRQQKTYEANKSAGMQDATDAEAARPETGALARRRRRAIPPSLEKGFVQGTQKAWS
AVLDTNVTTFIAAGLLFFFASGTVQGFGVTLSIGTVASMISALIIARVLVEWAVRRAVIK
KHPAITGIGKIGRVRAWLVKKNPQLMDYRRVGLVVAALVVLTAIAAPFVRDTNLGVEFTG
GRVLEYEITGDEPISVDEARSVISGLDFAGSDTAVVQEAGDGDISVRTGNISDPEAAAVA
NALDEATGGVELVSDELIGPSMGDELRNKALIALGAALALQMVYLAWRFRWSFGVSTMLS
LAFNMVLVIGLFIWLGKPIDGVFLAAILSVIGFTVNDTVVVFDRVRDEWARDDKSSFKEI
ANRAVVNTLPRTVNTTVGALIILGFLTFFGGSSLQDFSIAMLVGLTTGVISTVFVAVPLA
IWLQKWDKTPAPHVLKERKAKQKVAAKAARDNDDGAVV
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
ttgtccagtcaaacgggagccggggcgcgctggacacgcgcgctcatctcccttcttgtc
attctcgtcgcgttcggcgcggcgtggttcatcccaccgcggctggggctcgacctcagc
ggcggtacgcagatcgtcctggagacccaggacggcaccgacggcaccgaggccaactcg
gagaacaccgacaaggtcgtcgaggtgctgcgccagcgcatcgaccgcctcggtgtggcc
gaggcgaccatgtcgcgctccggtgagaaccggatcatcgtcgagctcccgggcgtgcag
gacccggcggaggccgcgcagatcgtcggccagaccgcccagctgtccttccaccccgtg
ctcggtgtcggcgacccgggcggccagggtgtgcaggcccccgacttcgccaacccgccc
gcggacgaggcccgtgctcccgccgacggtgaggacggcgcccccgcggagggcgagggc
cagctctccccggacgagctggacatggaggcgctcctcgaaggcatgggtggcgaccag
ggcatgccccaggcacccggcggagccccggcggagaaccccgccgacgtcgcgatgacg
ctgcccgacgacgagggccagatgctccagctgggcgaggccgccatccagggcgaccgc
gtctccagcgccgacgccgcgctcgacagcgtcaaccgcgcctcctgggtcgtcaacgtc
agcttccgcggcgagggccgcgagcagtggcgcgagctgaccggcgaggccgcctgcaac
ccgatcggtgaccccaagcgccgcgtggcgatcgttctggacggccagatcatctcctcc
ccgcaggtgaccgaggagaccggctgtgagtccggtatggccggcggccagaccaccatc
agcggcgcgaacttcaccagcgagagcgccaacgagctcgccgtcctgatcgagggcggc
tcgctgccgctgccggtcaccgaggtgcagcgccagacggtcggcccgaccctcggtgcc
gccgccatccaggccagcgccatcgccgcggtcctgggtatcgccttcaccgccctgtac
atcacgctggtgtaccggctcgtgggcttcctggcctcgatcgcgctggccttctacacc
ctgatcgcctacggtgcgctggtcgcgctgggggccacactcaccttgccgggtctggcc
ggtttcgtgttggcgatcggtatggccatcgacgcgaacgtgctgatcttcgaacgcgcg
cgtgaggagtatcagcgacaacagaagacgtacgaggcgaacaagtccgccgggatgcag
gacgccaccgacgccgaggccgccaggcccgagacgggcgcgttggcccgccgtcgccgc
cgtgcgattccgccgagcctggagaagggtttcgtccagggaacgcagaaggcctggagc
gcggttctcgacaccaacgtcaccacgttcatcgccgccggtctgctgttcttcttcgcc
tccggcaccgtgcagggcttcggcgtcacgctgagcatcggtaccgtcgcctcgatgatc
tccgcgctgatcatcgcgcgcgtgttggtcgagtgggccgtgcgccgcgcggtcatcaag
aagcaccccgccatcacgggtatcggcaagatcggccgggtccgcgcctggctggtgaag
aagaacccgcagctcatggactaccgccgtgtcggcctcgtcgtcgccgcactggtggtg
ctcaccgccatcgccgccccgttcgtccgggacaccaacctgggtgtggagttcaccggc
ggacgggtcctggagtacgagatcaccggcgacgagcccatctcggtggacgaggcgcgc
tcggtcatctccggcctggacttcgcgggctcggacacggcggtggtgcaggaggccggt
gacggcgacatctccgtgcgtaccggcaacatctccgatccggaggcagcggccgtggcc
aacgccctggacgaagcgaccggcggtgtggagctggtcagcgacgagctgatcggcccg
agcatgggtgacgagctgcgcaacaaggccctgatcgccctcggtgcggccctggccctg
cagatggtctacctggcctggcgtttccgctggtccttcggtgtctccacgatgttgtcg
ctggccttcaacatggtgctggtcatcggcctgttcatctggctgggcaagcccatcgac
ggtgtcttcctcgccgcgatcctgagcgtcatcggcttcactgtcaacgatacggtggtg
gtcttcgacagggtccgggacgagtgggcgagggacgacaagtcctcgttcaaggaaatc
gccaaccgggccgtggtcaacaccctgccgcgtacggtcaacacgaccgtcggtgcgttg
atcatcctgggcttcctgaccttcttcggcggttcatcgctccaggacttctccatcgcg
atgctggtcggtctgaccaccggtgtgatctccacggtgttcgtcgcggttccgctggcg
atctggctgcagaagtgggacaagacgcccgctccgcacgtgctcaaggagcgcaaggcc
aagcagaaggtggccgccaaggccgcccgcgacaacgacgacggggccgtcgtctag
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