Nocardiopsis exhalans: NE857_33025
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Entry
NE857_33025 CDS
T08285
Name
(GenBank) putative DNA binding domain-containing protein
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
nex
Nocardiopsis exhalans
Pathway
nex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NE857_33025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nex03400
]
NE857_33025
Enzymes [BR:
nex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NE857_33025
DNA repair and recombination proteins [BR:
nex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NE857_33025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_4
SLFN_AlbA_2
MarR_2
HTH_20
HTH_5
HTH_IclR
DIP2311-like_C
TrmB
HTH_Crp_2
HTH_28
HTH_24
HTH_29
Sulfolobus_pRN
DUF4143
Motif
Other DBs
NCBI-ProteinID:
USY19993
LinkDB
All DBs
Position
complement(7381300..7383078)
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AA seq
592 aa
AA seq
DB search
MDSDELLALVQNLRRFGGDLADVEVKRAHGKLPKSTHETLSAFANKEGGVLILGLDEKNG
FEAVGVKDVAKLVADLGSLCSEFEPPIRASIRPRRFESADLIVAEIPETLPADKPCHFKA
MGIYQGSFIRVGDGDRRMTQYEILGLLASKGQPKEDLEPVPGTSVDDLDPHLADAYLSRL
RRNRPYRYAESSDHEALTRTRVLVRDPGGREALSLGGLLALGEYPQEYFPQLMMSFVHYP
ESAGGSLRSGERFLDNVALEGPIPVMVRDALRVLKRNMKRRAVIHGVGRSDVWEYPEVAL
REAVVNALVHRDLAGHARGTQVQVAMYPDRLIIQNPGGLFGGVTVESLTDHPPSSSRNSI
LMNILQDVPIPETDQSVCEKRGSGIQDMLQALRSSQMSPPTFTDRLASFKVEFPNHTLLE
EDTVGWINSLNEQGLTDSQCVALALLRSGEALTNPRYRAATGVDSRVATAELQDLVAREL
AVQEGVRRSSRYRVHPDLDRDTDTTLVPVERPPRSRKDRTDEILAALDGRALSRAEIEAR
TGLARPTVLRWLNKLKKVGLVEAFGENRNELRYRRTGQQRLDEDAGGGADSR
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
gtggatagtgatgagctcttggcgctggtgcagaatctgcgacgcttcggaggggacctc
gccgatgtcgaggtgaagagagcgcacggcaaactccccaagtccacacatgagacactc
tctgccttcgcgaacaaggaaggcggcgttctgatcctcggcctggacgagaagaacggg
ttcgaagccgtcggggtgaaggacgtcgccaagctcgtcgccgatctcgggtcactgtgt
tcggagttcgagcctccgatccgtgcttccatcaggcctcgccgcttcgagtcggcggac
ctgatcgtcgcggagattcccgagacccttccagcggacaagccttgtcacttcaaggcc
atggggatctaccagggcagcttcattcgcgttggcgatggtgatcgccgcatgacccaa
tacgagatcctcggcttgctcgcctcgaaggggcaaccgaaggaggacctcgaaccggtc
cccgggacctcggtggacgaccttgatccgcacctcgcggatgcctacctgtcccgactg
cgcaggaatcggccctaccggtacgcggagtcgagcgaccacgaagccctcactcggact
cgggttctcgtcagggacccgggcggacgggaggcgctttccctgggtgggctgctcgca
ctcggagagtacccccaggagtactttccccaactcatgatgagcttcgtgcactatccg
gagagcgctggcggttccttgcggagcggtgagcgttttctggacaatgtggcgctcgaa
ggccctatcccggtgatggtgcgagatgctctgcgcgtactgaaacgcaacatgaagcga
cgcgccgtgatccacggtgtcgggaggtcggacgtctgggaatacccggaagtcgctctg
cgagaagcggtcgtcaacgccctggtccaccgtgatctcgccggtcatgcccgtggaaca
caggttcaagtggcgatgtacccggaccggctcatcatccagaacccgggcgggctcttc
ggcggggtcacggttgaaagcctgacggaccatccgccgtcctcctcgcgtaactcgatt
ctgatgaacatcctccaggacgttcctatcccggaaaccgaccagagtgtctgcgagaaa
cgcggatccggcattcaggacatgttgcaggcgctgcggtcatcgcagatgagcccaccg
accttcacggaccggctggcgtcgttcaaggtcgagttccccaaccacacgctcttggag
gaggacacggtcggatggatcaactccctcaacgagcaggggttgacggacagccaatgt
gtcgccttggccctgctgaggtccggagaggctctgaccaacccgcgctaccgggcggcc
acgggggtggactctcgcgtggcgaccgctgaactccaggacctcgtggctcgtgaactc
gcggtacaggagggggtgcgtcgttcgtcgcgctatcgcgtccatcccgacctcgacagg
gacacggatacgaccctcgtgccagtggagcggccgccccggagcaggaaggaccgcacg
gacgagatcctcgcggctctggacggtagggcactgagccgtgcggagatcgaagcccgt
acgggcttggcccgaccgacggtcctgcggtggttgaacaaactgaagaaggtcggcctg
gtggaggcgttcggagaaaaccgtaacgagcttcgttaccgccggactggacaacaacgg
ctcgacgaggacgcgggcggaggggccgactcgcgttga
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