Neochlamydia sp. S13: NCS13_1_0609
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Entry
NCS13_1_0609 CDS
T05849
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ney
Neochlamydia sp. S13
Pathway
ney03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ney00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCS13_1_0609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ney03019
]
NCS13_1_0609
03016 Transfer RNA biogenesis [BR:
ney03016
]
NCS13_1_0609
Enzymes [BR:
ney01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NCS13_1_0609
Messenger RNA biogenesis [BR:
ney03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NCS13_1_0609
Transfer RNA biogenesis [BR:
ney03016
]
Prokaryotic type
tRNA degradation factors
NCS13_1_0609
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
EMYY_lipop
S1_RRP5
KH_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
BBI16804
LinkDB
All DBs
Position
complement(802730..804820)
Genome browser
AA seq
696 aa
AA seq
DB search
MQPHLMKVKVGEQELIFETGKIGKQANGAVLIKAGETYLFNSACAAANAADNIDFFPLKV
DYQEKFSAVGKTISGFIKREGRPSEKETLISRLIDRPIRPMFPEGYYNEVQLLSYVWSYD
GINMTEPLAICGISAALVISDIPLLKPIAGVRIGLIDGKWLVNPTQEQMTKSKLDLMLAG
TEDAILMIEGHCDFLTEDQLMEAIEVGHNSIKIICQALLNWQKEIGKEKNLTTLRSLPTE
LIGEVEKLATPLLEPALRSNLKQDREEKLNAMRKAVVDTLLPEGEEPKYSVNQVNAALKD
LQSKYMRKMILEENIRSDGRDSKQIRSIDIEQGLLPRTHGSSLFTRGETQAVGVCTLGGE
AMSQRYEDLDEESSRRFYLQYFFPPFSVGEVGRIGAPGRREIGHGKLAERALSAIIPARD
IFPYTMRLESTITESNGSSSMATVCAGCLSMMDAGVPIKRPIAGIAMGLILEEGRYKILS
DILGIEDALGDMDFKIAGDQHGITAFQMDIKVEGITPAIMQAALNQAKEGRIHILNKMLE
VCPTFKPQMSIYAPRIETMQIKPSKIATVIGPGGKQIRAIIEASGVEIDINDDGLISIAS
TNLEGIEKAKAIIHGLTAEVEIGRTYTGKVTSVVAFGAFIEILPGKEGLCHISEFEHTRI
ENLADHVKQGEVISVKVLDINERGQLKLSRKALLSK
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccacacctcatgaaggttaaagtaggcgagcaagaactaatatttgaaacagga
aaaattggtaaacaagccaatggggctgttttaataaaagcaggcgaaacttatcttttt
aatagcgcttgtgcggcagctaacgcggctgataatattgattttttccctttgaaagtt
gattaccaagaaaaattttctgcggtgggtaaaacgattagcggctttataaaaagagaa
gggcgcccttccgagaaagaaacccttatttcacgccttatagaccgtccaatacgtccc
atgtttcccgaaggctattataatgaagttcaattattgtcttacgtatggtcttacgat
ggcattaatatgacagagccattggcaatctgtggcatttcagccgctttagtgatctcc
gatattcccttattaaaacctatagctggtgtacgtattggcttaatagatgggaagtgg
cttgtcaaccccactcaagagcagatgaccaaatctaaattagatttaatgttagcagga
accgaagatgctattcttatgatcgaaggccactgtgattttctgaccgaagatcaactc
atggaagccattgaagtgggccataatagtatcaaaattatttgccaagctctactcaat
tggcaaaaagagattggtaaagaaaaaaatctgaccacccttagaagcttgcctacagaa
ctcataggagaagttgaaaaacttgctacgcctcttttagaacctgctttaagaagcaat
ctaaagcaagatcgtgaagaaaaattgaatgctatgagaaaagctgtggtagataccctt
ttacctgaaggagaagaacctaaatattccgttaaccaggttaatgcggctcttaaagat
cttcagtctaaatacatgcgtaaaatgatcttagaagaaaatattcgtagcgatggacgt
gacagtaaacagattcgttcaatagatatcgagcaaggccttctgcctcgtacgcacggt
agttcattatttacacgcggtgaaacacaagcggtaggtgtatgtacattaggtggggaa
gctatgtctcaaagatatgaagatctcgatgaagagagtagccgtagattttatcttcaa
tatttcttccctcccttctctgtaggagaagtaggacgcataggcgccccaggacgccgt
gaaattggccatggaaaattagcagaaagagctttgtcagctattatacctgctcgagat
atctttccttataccatgcgcttagaatccaccattacagaatccaatggttcctcatcg
atggctacagtatgtgctggctgtctttctatgatggatgcaggagtacctattaaacgt
ccaattgcaggaattgccatgggattgatcttagaagagggacggtacaaaattttgtct
gacatattgggaatcgaagatgctttaggcgacatggactttaaaattgctggtgatcag
catggcattacagccttccaaatggatatcaaagtagaaggtattacccctgctattatg
caagcggctctaaatcaagctaaagaaggtagaattcatatccttaacaagatgttggaa
gtttgtcctactttcaaaccgcagatgtctatctatgccccgcgtattgaaaccatgcaa
attaaacctagtaagattgcaacagtgataggtccagggggaaaacaaattcgagctatt
atcgaagcctccggggtagaaattgatatcaacgatgatggtttgattagcatagcctct
acaaacttagaaggtattgaaaaagccaaagctattattcatggcctaacagctgaagta
gaaataggtagaacatatacaggtaaagttacctctgtagtagcttttggagcatttata
gaaattttaccgggtaaagaaggattatgccatatctctgaatttgaacatacacgcatt
gaaaacttagccgatcatgtcaaacaaggagaagtaatctctgtaaaagttttagatatc
aacgaacgtggccagcttaagttaagccgcaaagcccttcttagtaaataa
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