Neochlamydia sp. S13: NCS13_1_0829
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Entry
NCS13_1_0829 CDS
T05849
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
ney
Neochlamydia sp. S13
Pathway
ney03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ney00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NCS13_1_0829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ney03400
]
NCS13_1_0829
DNA repair and recombination proteins [BR:
ney03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NCS13_1_0829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_14
DUF5315
AAA_27
Rad17
AAA_29
Motif
Other DBs
NCBI-ProteinID:
BBI17024
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Position
1084204..1086747
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AA seq
847 aa
AA seq
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MNTPSFDVSSEFKVSPMMSQWQACKQAAGEAVLLFRLGDFYEAFDADAVLIAKELDLTLT
KRGEIPMAGIPHHTSEAYIDRLVSKGFRVAVAEQIGDPKTTKGIVKREIVRIVTPGTVIN
STLLSDKANNFFASIHRVGEVFGLSFIDLTTSEFRVVEFENEQELLNEIFRLRPSECLVS
HKFQSKHQDLLKNLRQAQDFLLTAQEDWRFEHQTAYNFLINHFGVHNLDGFGLRGMLAGI
NAAGAILNYLQDNLCLSIEHIQEVRTYSTSQFMSLDRITQRNLEITASLYDGSRKSTLLN
ILDKTCTPMGARLLLNWVKLPLLSIEEIKRRQDAIEAFFNNKTAIDLVKKLLGRVRDLER
LMMKISSGYASPRDLVALKCSFEEFPQLKQALQPLTIYSTLLEQEEQKLENPTSMTDLIA
RALVDEPPLKISDGQVFREGYNNELDELRSIRQDSRAWLANYQTRLREETGIKTLKVGFT
RMFGYYIEVSKGQSDRMPATFQRRQTLVNGERYITSELKEFEQKVLNAEERILAIETGLF
NALREEVTKYTKQVFSIAQAIAKIDALRSLAEVALFYDYTRPIVDHSSILQIISGRHPVI
EAINTGEKFVPNDTLMDNEANLLLLITGPNMAGKSTYIRQVALITIMAQIGSFVPAKSAH
IGVVDKVFTRIGASDDLSRGQSTFMVEMTETANILNNATGRSLVILDEIGRGTSTYDGIS
IAWSVAEYLLTTEGSQAKTLFATHYWELTKLEERVPGAVNYHVAVHEAEDVIVFLRKIVR
GSTDKSYGIHVGRLAGLPLQVILRAKEILAHLEENANQKSVFEPSKPKRQMPAKKNKFNE
RQMTFFG
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgaatactccctcttttgatgttagttctgaatttaaagtttcacctatgatgagccaa
tggcaagcttgcaagcaagcagcaggagaagctgttttactttttcgcctaggggatttt
tatgaagcgtttgatgcggatgctgttttaattgctaaggaattagatcttacgcttact
aaaagaggcgagattcctatggcaggcattcctcatcacactagcgaagcttacatagat
agattagtatctaaaggatttagagtagctgttgccgaacaaataggggatcctaaaacc
actaaagggatagtaaaaagggaaattgttagaattgttacccctggtactgtgattaac
tctaccttattatccgataaagcaaacaacttttttgcttctattcatcgagtaggagag
gtttttggactttcatttattgacttaaccactagtgagtttagagtggtagagtttgaa
aatgagcaagaactactcaacgaaatttttcgtttacgtccttcagaatgcttggtctct
cacaaatttcaatctaagcatcaagacttattaaaaaatcttcgacaggcacaagatttt
ctcttaacagctcaagaagattggcgttttgaacatcaaacggcttataactttttaatc
aaccattttggtgttcataatttggatggttttggcttaagaggcatgctagcaggtata
aatgcagcaggggctatcttgaattatcttcaggacaacttgtgcttatcgatcgagcat
attcaggaagttcgtacctattctacctcgcaatttatgtctcttgatcgcatcacgcaa
agaaatttagagattacagccagcttgtatgatggctctaggaaaagtactctattgaac
atcctagataagacctgtactcccatgggtgcacgtttgttgcttaactgggtaaagctt
ccacttctatctatagaagaaattaagcgtcgtcaagatgctattgaggcttttttcaat
aataaaacagctattgatttagttaaaaaattgctaggaagagtcagggatttagaacgt
ttaatgatgaaaattagctccggctatgcctcgccccgagatttggtagctttaaaatgt
tcttttgaagaatttccccaacttaagcaagccttgcagcctttgaccatttactcaacc
ttattggagcaagaggaacaaaagttagaaaatccgacctcaatgacagatctaatcgct
cgcgctttagtcgatgagccacccttaaagatcagtgacggacaagtctttcgggagggc
tataataatgaattggatgaattgcgttccatccgtcaagatagcagagcttggttagct
aattatcaaacgcgtttacgcgaggagacaggaattaaaaccttaaaggtaggttttacg
cgcatgttcggttattacatagaggtgagcaaaggtcaatctgatcgtatgcccgcaact
tttcagcgtaggcaaaccctggtcaatggggaacgttacatcacttcagagctaaaagaa
tttgagcaaaaagttttaaatgctgaagagcggattttagccatcgaaacaggcctattt
aatgcccttcgcgaagaagtaaccaagtatacaaagcaagtttttagcattgctcaagct
atagccaaaattgatgccttacgttcattagcggaagtagcacttttctatgattatacg
cggcctatcgtagatcatagtagcattttacaaattattagcggccggcatcccgttatt
gaagccattaatacgggagaaaaatttgtccctaatgacactctcatggataatgaggct
aatcttttactgctcattacaggccctaatatggcaggcaagtctacctatattcgccag
gtagctttgataactattatggcgcaaataggttcttttgttcctgctaaaagcgctcat
atcggtgtcgtcgataaagtgtttacacgcataggagctagcgatgacctttcccgaggc
caatccacttttatggtcgaaatgactgaaacagcaaatattttaaataatgctactggc
agatctttggtcattttagacgaaattggaagagggacaagtacctatgatggaatttca
atcgcttggtcagtagctgagtatttattaacaaccgaaggtagccaggctaaaactcta
tttgcaacgcattattgggagttaacaaaattagaagaacgcgtgccgggcgcagtcaat
tatcatgtagccgttcatgaagcagaagatgtcattgttttcctgcgcaaaattgtgcgg
ggaagcacagataaaagttatggaattcatgtaggccgtctagcaggccttcctttacaa
gttattttaagagctaaagagattttagcgcatttagaagaaaatgctaatcaaaaaagc
gtttttgaaccctccaagcctaaaaggcagatgccagcaaaaaaaaataaatttaatgaa
aggcaaatgactttctttggataa
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