Neochlamydia sp. S13: NCS13_1_1022
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Entry
NCS13_1_1022 CDS
T05849
Name
(GenBank) Putative alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
ney
Neochlamydia sp. S13
Pathway
ney00300
Lysine biosynthesis
ney00470
D-Amino acid metabolism
ney00550
Peptidoglycan biosynthesis
ney01100
Metabolic pathways
ney01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ney00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NCS13_1_1022
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NCS13_1_1022
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NCS13_1_1022
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NCS13_1_1022
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ney01011
]
NCS13_1_1022
Enzymes [BR:
ney01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
NCS13_1_1022
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
NCS13_1_1022
Peptidoglycan biosynthesis and degradation proteins [BR:
ney01011
]
Precursor biosynthesis
Amino acid ligase
NCS13_1_1022
Racemase
NCS13_1_1022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
BBI17217
LinkDB
All DBs
Position
1318793..1321318
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AA seq
841 aa
AA seq
DB search
MDPFDLRLWEGFSAALSGAYIGSPIVDQICIDSRLISSPHALFVALPGQVEDGHDYIEQA
AIAGARFAIVRDDWQPAKLPAINLLRVLDPLKAFQEIATAYRHQLKPFIVGITGTHGKTM
VKDLLQAMIAPTKRVIASPGSFNSQVGVPLSILNISQQHEIALIEAAVSQDNEMDHLAKI
IHPQACILTHLGKKHLITFGNQQALVAETVKLITVPPENKWALIPETPFLEPYLKQIKAP
YYFWNRESPFLPHAHLLNKPYDAEMLYGIKFPCGTYLKERINAGFYYFMDLLNISVKAAW
LLGVSAEVIKEVLCNYILEPMRTEIWKSPIGATFINETYSSDPQSVDQALKHFEHSSNEQ
RRIFIFGGIRGKKENNTSEYRRIGHALIKNKVQMLALVGSHDFQEIINIANQAKSPLEIC
HYNSYRDALEQMQAHIKGNDYVVIKNERKESLNNLIKIFNDSIASNQCFINLAAIQSNIA
TIRHKVGANTRLMVMVKALAYGTEEIRIGKFLSTCGVDILGVSCVDEGVVLKRAGVKQSI
FVIHSSIYEIAKIVKWELEVGVSEKEFITALASEASKQNKSIRVHLHVDTGMNRLGCPAN
NAFELATLIKDCPHLILEGLMTHFACADDPKQDSFTLAQAQSFDAVIAQLKKHHIAANYY
HASNSSAVVRFDFNQYNMVRVGLAIYGLHCSEATRQAMELRLSLTLVSRIAGINYCKAGD
TISYGRSYLVERDKQIIAVLPIGYFDGLHRHYSGKGYVLIRGQKAPMVGKICMDFMMVDV
TDIENVAIGDAVLIFGEDEHGQYLAPEEVASQGDSIVHELITCLGPRIQRIFIHEETNQK
S
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggatccatttgacctaagactttgggaaggcttttctgcagccctatctggcgcttat
ataggctcccctattgtggatcaaatctgcattgactctcgcttaatttcctctccccat
gcactatttgtagctttaccaggacaagttgaagatggtcatgattatattgaacaagca
gccatagcaggcgcacgctttgcaattgtacgcgatgattggcaaccagccaagttacct
gctattaatcttttacgtgttttagatcctttaaaagctttccaagagatagctacggcc
tatcgacatcaacttaagccctttatagtcggcatcactggtacgcatggtaaaacaatg
gttaaagatttgctacaggcgatgatagcacctaccaaaagagtaatagcatctcctggt
agctttaatagccaagtgggcgtgcctttaagcattctcaacatctctcaacagcatgag
attgcgctgatagaagcagcggtgtcccaagataatgaaatggatcacttagcaaaaatt
attcatcctcaagcctgtatactcactcatttaggcaaaaagcatctgatcactttcggc
aaccaacaggcccttgtagcagaaactgttaagcttataactgtccctcctgaaaataaa
tgggcccttatccctgaaactccttttctcgagccttatttaaagcaaattaaagctcct
tactatttttggaatagagaaagtccttttcttccccatgctcatcttttaaacaaacct
tacgatgcagagatgctttatggcattaaatttccttgcggaacttatttaaaagaaaga
attaatgctggcttctattatttcatggatcttcttaacatttcagttaaagctgcctgg
ctcctgggagtctctgctgaggtaatcaaagaggtcctttgtaactatatcctagagcca
atgcgcacagaaatatggaagtcgccaataggcgcaacatttatcaatgagacttatagc
tctgatcctcaatctgttgatcaagcccttaaacattttgagcactcctctaatgaacag
cgtaggatatttatttttggtggcatacgaggaaaaaaagaaaataacacttcggaatat
aggcgcataggccatgctcttataaaaaataaagtgcaaatgctagctttagttggctcg
catgattttcaagaaatcattaacatagctaaccaagcaaaaagtcctttagaaatttgc
cattacaatagctatcgcgatgcccttgagcagatgcaagcccatataaaaggcaatgat
tatgtagtcatcaaaaatgaacgtaaagaatcattaaataatttaataaaaatttttaat
gatagtatagccagcaatcaatgttttataaatcttgctgctatacaatccaacattgca
accattcgccataaggtaggagctaacacgcgccttatggtgatggttaaagcgttagct
tacggcaccgaggagatacgcataggaaaatttttatccacctgcggagttgatatcttg
ggcgtttcttgtgtagatgaaggggtagtccttaaaagagctggcgttaagcaatcaata
tttgtgatccattcttctatttatgaaattgcaaaaattgttaaatgggagctggaagtg
ggggtaagtgaaaaggaatttattactgccctagcaagcgaggcttctaaacaaaataaa
agcattcgagtacacttgcatgttgatacaggaatgaatcgcctagggtgcccagctaac
aacgcctttgagcttgcgactttaatcaaagattgcccccatcttattttagaaggctta
atgacccattttgcctgtgctgatgaccccaagcaagactcttttacattggctcaagcg
cagagctttgatgctgtcattgcccagttaaaaaagcatcatattgcagctaactattac
catgcctcaaactcaagcgcagttgttagatttgattttaatcagtataacatggttcgc
gtgggtttagctatctatggactccactgctcagaagctacccgccaggcaatggaattg
cgactctctcttacgcttgtttcaaggatagcgggcattaattattgcaaagcaggcgat
accattagctatggccgcagttacctcgtagaacgggataaacaaataatcgctgtcctt
cctattggatattttgatggccttcatcgccattacagtggaaaagggtatgttctcatt
cgagggcaaaaagcacctatggtaggaaaaatctgtatggattttatgatggtagatgtt
acggatattgagaatgtagccattggagatgcagtattgatctttggtgaggatgagcat
ggccaatatcttgctcctgaagaagtagcttcccagggagattcgattgtccatgaattg
attacctgcttaggacctcgtattcagcgaatatttatccatgaagaaactaaccaaaaa
agctaa
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