Neochlamydia sp. S13: NCS13_1_1041
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Entry
NCS13_1_1041 CDS
T05849
Name
(GenBank) exodeoxyribonuclease V
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ney
Neochlamydia sp. S13
Pathway
ney03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ney00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCS13_1_1041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ney03400
]
NCS13_1_1041
Enzymes [BR:
ney01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NCS13_1_1041
DNA repair and recombination proteins [BR:
ney03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCS13_1_1041
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
HHH_RecD2
AAA_30
OB_YrrC
UvrD_C_2
SH3_13
HHH_5
AAA_11
NAT10_TcmA_helicase
PhoH
Viral_helicase1
ABC_tran
SLFN-g3_helicase
PIF1
UvrD-helicase
RsgA_GTPase
DEAD
AAA_22
RNA_pol_A_bac
AAA_29
AAA_28
Pneumo_phosprot
Herpes_Helicase
AAA_16
KOW6_SPT5
HHH_3
nSTAND3
AAA_23
Motif
Other DBs
NCBI-ProteinID:
BBI17236
LinkDB
All DBs
Position
1349396..1351585
Genome browser
AA seq
729 aa
AA seq
DB search
MLMEIVVGYIERITFQNAETGYTVAQLKTAQLKELVCVVGVMPTALPGVTARCKGHWKQH
LVHGRQFICQEYQVEAPADLLGIKKYLGSGLIKGIGPKYAERIVEKFGIETLNVIDQASH
KLLEIEGLGEKRIEKIRSCWDEQKSVREVMIFLQSKGVSPVYAQKIYKNYGNHSIEKVQQ
NPYILAQEITGIGFKTADAIAKKMGMEHDAPSRIDAGIEFILSELAKDGHVCFPLEEFVA
EASEKLEVESLKVNARISSLKDERRIELFDLVNNQKIQTFIWNMSLFVAESGIAREIKRL
NSCACNLRAVDIPKALEWVQLKLNIKLANNQSIAIKNSLYQKLHIITGGPGTGKSTITNA
ILAITEKLSGKILLMAPTGRAAKRMSEITGKKASTIHSILEYNFKNGGFKRNRENPLDCD
LLIVDEASMIDTFLMYSLLKAIPNTCRLIFVGDINQLPSVGPGNVLSDMINSQTISVTLL
TEIYRQAAGSRIITNAHKINSGVFPDIHNHSESDFFFLEAVTPEEVLKNIIALIAQRLPQ
RYGYDPLHDIQVLTPMRKGIIGADNLNTVLQETLNKNSNPLFRAGRKLLVGDKVMQIRNN
YKKEVYNGEIGVIKEIDIIEQQVLIQIEDRNIIYEFTDLDEIVLAYAVSVHKYQGSQCPC
IIMPVHTTHFALLYRNLLYTGVTRGQKHVILVGSKKAIAIAIKNDEVKKRHTGLYHALIG
INNISVSMP
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgcttatggaaattgttgttggctacattgagagaattacctttcaaaatgcagagaca
ggctatacggttgcacagctaaaaacagctcaattaaaagagcttgtatgtgtggtcgga
gtcatgcctactgctcttcctggagttacggcgcgctgtaaaggacattggaagcaacat
ttggtccacggccggcaattcatctgtcaagaatatcaagtagaagcccctgctgatctt
ttaggaatcaagaaatacttaggctcagggctgatcaaaggaattggccctaaatatgct
gagcgcattgtggaaaaatttgggatagaaaccctcaatgtaattgatcaagcttctcat
aaattattagaaattgaagggctaggagaaaaaagaattgaaaaaattagatcctgctgg
gatgagcaaaaatctgtgcgagaggtcatgatatttctgcagtctaaaggtgtaagtcct
gtctatgctcaaaaaatctataaaaattatggtaatcatagcattgagaaagttcagcaa
aacccttacattcttgcccaagaaattacaggcattggattcaaaacagcggatgctatt
gccaaaaaaatgggaatggaacacgatgccccttcaagaattgatgcaggcattgaattt
atcttatccgaattggctaaggatggacatgtctgttttcctttagaagagtttgttgcc
gaagcttcagaaaagctggaggtggagagcctcaaagtgaatgcccgtatttcctcttta
aaagatgaacggcgcatcgaactattcgatctggttaacaaccaaaagattcaaactttt
atctggaatatgtccttgtttgtagcagaatcgggcattgcccgtgaaattaaacggtta
aatagctgtgcatgtaatttaagggctgtggatattccaaaagctcttgagtgggttcag
ttaaagttaaatattaaattagctaataaccaaagcattgctataaaaaatagcctttat
caaaaacttcatattatcacaggcggccccggtacggggaaaagtaccatcacgaatgct
attttagctattacagaaaaattgagtggtaagattctcttgatggcgcctactgggcgt
gccgctaagcgtatgagtgaaattacaggtaaaaaagcctccactattcatagtatattg
gaatacaattttaaaaatgggggttttaaacgtaatcgcgaaaatcctttggattgtgat
ttactgatagtggatgaagccagtatgattgatacctttcttatgtatagcttattaaaa
gctattcccaatacatgcagacttatctttgtgggagacattaatcagctaccaagtgta
ggccctggcaatgtcttaagcgatatgattaactcacagacaatctcagtcaccctgcta
acagaaatttatcgtcaagcggcaggctcgcgtattattactaatgctcataaaattaat
agtggggtctttccagatattcataaccatagtgaaagcgattttttcttccttgaagct
gtaactcctgaagaagtattaaaaaacattatcgctcttattgcccaaaggcttccccaa
aggtatggctacgatcctctccatgatatccaagtgttgacacccatgcgtaaaggaatc
attggtgccgacaacttaaacactgttttacaagagactcttaataaaaacagcaatccc
ttatttagagcagggagaaagttattagtcggagataaagttatgcaaatccgcaataat
tataaaaaagaggtttataatggagaaataggagtaatcaaagagatagacattattgaa
caacaagttcttatacaaatagaagatcgtaacattatttatgaatttactgatcttgat
gaaattgtccttgcctatgctgtttccgtgcataaatatcaaggtagtcaatgtccttgt
attattatgcctgtgcatactacccattttgctttgttatatcgcaacttactctacacg
ggggtaacacgtgggcaaaagcatgtaatccttgtcggaagcaaaaaagcgattgctatc
gctattaaaaatgatgaagtaaaaaaacgtcataccggactctatcatgctcttatagga
attaataatattagcgtaagcatgccgtaa
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