Neochlamydia sp. S13: NCS13_1_1130
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Entry
NCS13_1_1130 CDS
T05849
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ney
Neochlamydia sp. S13
Pathway
ney03030
DNA replication
ney03430
Mismatch repair
ney03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ney00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCS13_1_1130
03430 Mismatch repair
NCS13_1_1130
03440 Homologous recombination
NCS13_1_1130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ney03032
]
NCS13_1_1130
03400 DNA repair and recombination proteins [BR:
ney03400
]
NCS13_1_1130
Enzymes [BR:
ney01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCS13_1_1130
DNA replication proteins [BR:
ney03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCS13_1_1130
DNA repair and recombination proteins [BR:
ney03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCS13_1_1130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
DUF655
DUF1836
A-2_8-polyST
HHH_3
Motif
Other DBs
NCBI-ProteinID:
BBI17325
LinkDB
All DBs
Position
complement(1445595..1449344)
Genome browser
AA seq
1249 aa
AA seq
DB search
MWVPLHVHSQFSILDAAADVHAIAKKAAFFHMPAVALTDHGNMFGAIDFYKACKDVGVKP
ILGSEFYVAPDSRFDKKKEYGARTNFHLTILAKNKAGYHNLCKLTSIGYLEGFYYHPRID
HEVLKLHSEGLICLSGCQSSLIAYEALNGTKDSLISKIRWYQELFGDDYYLELQRHRMTD
QDIRQDGLHQETWLQQYYQDYIQKQEKINTTLIEISKELNIKTVATNDSHYIERADWRAH
EILLNIQSGEPTEMWEKDSYGNPKFRVPNPKRRTYPSHECYFKSPQQMAELFSDFPEALS
NTLEIAEKCNVAIDFKTKHYPIYLPPSLEGKNYTKEEQSEAVKNYLWQLCEEGISKRYTP
ERLNKIKEIFPEKDPLHIVQERLKYEMDIIVPKGMSDYLLIVWDFINWAKRQGIPVGPGR
GSGAGSIVLYLIGVTDIEPLRFHLFFERFINPERLSYPDIDVDICMDGRSEVINYTLQKY
GKDNIAQIITFGTMKAKMTIKDVGRVLSVPLAKVNAIAKLVPDDLNITLEKALEKDPDLR
AMYEQDEDAQRIIDIGKTLEGSIRNTGIHAAGIIISGEPLTNFIPVCLSKDSDMPVTQLS
MKPVELVGMLKVDFLGLKTLTAIHICVKAIYKRVGKAIDWINLPLDDQPTFNLLNQGKTL
GIFQLESAGMQDLARQLHLDKFEEIIAVGALYRPGPMDMIPSFINRKHGREPIEYDHPWM
NDILAETYGIMVYQEQVMQIASKLAKFSLGEGDVLRRAMGKKDMDQMLQQREKFRLGSLE
NGIDEETSMQIFDKMEKFAAYGFNKSHAAAYGYLSYVTAYLKANYPNEWMAALMTCDSDD
LTKVTKFIGECQEMGIAILQPDVNEAHATFFATPQGIRFAMAGIKGVGEGVVEAIIKERN
RGGPYTSLYQFIKRIDNTKVGKKVIENLVDAGCFDFTSWSRDSLRQSIDPIYETVLKEKQ
EASAGVLSLFALMGESSESRFIHPPEVKKKTSRLDTLLREKELLGFFLTGHPMDAYREII
TRLSCIPLSHVQNLEHNAVFRAALIVETAEIRVSSKTQKKFAILMVSDGMDRYEMPIWSD
LFEQKSLLLKENQLLYAVIQVDKKEDSLRLSCKWIDDLTKANEAMVEECDRAFDKAKLQA
ARFAKAIGEGRDKKVEKSKVVLEKKREVMKESKTLSLKIDLDSVRLTQIMQLKGLFIEHR
GTTPIQLEFHCQEDVHAILHIESRWGVTLTPELESKLKSLPFIKRHSLN
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgtgggttcccttacatgtccattctcaattttccatcttagatgctgctgctgatgta
catgctattgccaaaaaagcagctttttttcatatgcctgcagtagctttaacagatcat
ggtaacatgtttggggctattgatttttataaggcctgtaaagatgtgggggttaaaccc
atcttaggcagtgagttttatgtagcacccgactcgcgatttgacaaaaaaaaagaatat
ggagcacgtactaattttcatttaactattttagctaaaaataaagctggttatcacaac
ttatgtaaattaacttccatcggttatctagagggattttactaccatccacgcatcgat
catgaagtgcttaagcttcatagtgaaggattgatttgtctatcaggttgccaaagtagc
ttaatcgcttatgaagctttaaatggcacaaaagatagcttaataagcaaaatccgttgg
tatcaagagctctttggggacgattattatcttgaattacaacgccaccggatgacagat
caagatattcgccaggacggcttgcatcaagaaacctggcttcagcaatattatcaagac
tatatacaaaaacaagaaaaaattaataccactcttatagaaatatccaaagagcttaac
ataaagaccgttgctacaaatgatagtcattacattgaacgtgctgattggcgcgctcat
gagattttacttaatattcagtctggggagcctactgaaatgtgggaaaaagactcgtat
ggcaacccaaaatttcgcgtgcctaaccccaaacgtcgtacttatccctctcatgaatgc
tattttaaatctcctcaacaaatggccgagctttttagcgattttccagaagctctatcc
aataccttggaaatcgctgaaaaatgtaatgtggctattgatttcaaaaccaagcattat
cccatttacttacctccttctcttgagggaaaaaattacactaaagaagagcaatctgag
gccgtaaaaaattatctatggcaattatgcgaggaaggtatttccaagcggtatacacct
gaacgtttaaataaaataaaagagatctttcctgagaaagatcctctccacattgtgcag
gagcgcttgaaatatgagatggacattattgttcccaaagggatgagtgattacttgctg
attgtatgggattttatcaattgggccaaacgtcaggggatccctgtaggaccaggtaga
gggtcgggggctggttctattgtgctttatcttattggggtgaccgatatcgaaccccta
cgttttcatctgttttttgagcgtttcatcaatcctgaacggctttcttatcctgatatt
gacgtagatatttgtatggacgggcgcagtgaggtaattaactatacccttcaaaaatat
ggtaaagataatattgcgcagatcattacttttggcaccatgaaagcgaagatgaccatt
aaggatgtaggacgggtattaagtgttcctttggctaaggtaaatgcgattgctaaactt
gtaccggatgaccttaatataacccttgagaaagctttagaaaaagatccagatttacgg
gctatgtatgagcaggacgaagatgctcaacgtatcatcgatataggtaaaactttagag
ggatctattcgcaatacaggcattcatgctgcaggcatcattatcagtggagagccgctg
actaactttatacctgtttgcctttctaaagattctgatatgccagtgactcagctctcc
atgaaacctgttgaattagtgggaatgctaaaggtggattttttaggccttaaaacattg
accgctattcatatatgtgtaaaggcaatctataaaagggtgggtaaagccattgattgg
attaatcttcctttagatgatcagcctacctttaatcttttaaaccaaggaaaaacttta
ggcatctttcagctggaatctgcaggcatgcaagatttggcgcgccagctccatttggat
aagtttgaagaaattattgccgtaggagctctctaccgcccaggccctatggatatgatt
ccttctttcattaatagaaaacatggtcgtgaacccattgaatatgaccatccatggatg
aatgatattcttgcagaaacctatggcattatggtttatcaagagcaggtgatgcagata
gctagtaaacttgccaaattttcgctaggtgaaggggatgtactgcggcgtgctatgggt
aaaaaagatatggatcaaatgcttcagcaacgagaaaaatttcgtttaggttcgttggaa
aatgggattgatgaagaaacctcgatgcaaatttttgataaaatggaaaaatttgctgcc
tacggatttaataaatcccatgcagctgcctatgggtacctctcctatgtgactgcctat
ctgaaagctaactatcctaatgagtggatggctgctctcatgacgtgcgacagtgatgat
ttaacaaaggtaactaaattcattggggaatgccaagaaatgggtatcgccattttgcaa
ccagatgttaacgaagcgcatgctacgttttttgctactcctcaaggaattcgttttgcc
atggcaggtattaaaggagtgggagaaggagtcgtggaagctattattaaggaaagaaat
agaggcggtccttatacgagcttatatcaatttattaaaagaattgataacacgaaagta
ggcaaaaaggtcattgaaaacttggtggatgcaggatgttttgattttactagctggtcg
agagatagcttaaggcaaagtattgatcctatctatgaaactgtgctaaaagaaaagcaa
gaagcttcagctggcgtcttatccctttttgctttgatgggagagtcctccgaatctcgt
tttattcatcctcctgaagtaaaaaagaagacctcccgattagatactcttttacgagaa
aaagaacttttgggcttttttctaaccggtcatcccatggatgcttatcgtgagattatc
acacggctttcttgcatacctttaagccatgttcaaaatctagagcacaatgctgtcttt
cgggcagctttgattgtagaaacagctgaaatacgagtctcttctaaaacacagaaaaag
tttgccatcttgatggttagcgatggcatggatcgttatgagatgcctatatggtctgat
ttatttgagcagaaaagcttattgttaaaagaaaatcaattattgtatgcagtcattcaa
gtagataaaaaggaagactctcttcgactttcttgtaaatggatcgatgatttaactaaa
gctaatgaagcgatggtagaagaatgcgatcgggcttttgataaagctaaattacaagca
gcgcgttttgcaaaagctataggagaggggcgagataaaaaagtagaaaaatcaaaggtc
gtactagaaaaaaagagagaagtaatgaaagagtctaagactttgtctttaaaaatagat
ttggacagtgtgcgtttaacacaaattatgcaacttaaagggttatttatagaacatcgt
ggaaccacgcccattcaattagagtttcattgtcaggaagatgtgcatgccattttacat
attgaaagccgctggggagtaactttaacgcctgaattagaatccaagcttaaatcactt
ccctttattaagaggcattctttgaattaa
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