Neochlamydia sp. S13: NCS13_1_1587
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Entry
NCS13_1_1587 CDS
T05849
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ney
Neochlamydia sp. S13
Pathway
ney03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ney00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCS13_1_1587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ney03400
]
NCS13_1_1587
DNA repair and recombination proteins [BR:
ney03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCS13_1_1587
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCS13_1_1587
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_30
AAA_22
P-loop_SecA
AAA_25
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BBI17782
LinkDB
All DBs
Position
complement(2035004..2036998)
Genome browser
AA seq
664 aa
AA seq
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MFKLVTDYEPCGDQPQAIEKLSEGVLQERKTQVLLGITGSGKTFTIANVIARTQRPALII
AHNKTLAAQLYQEFKTFFPHNAVEYFVSYYDYYQPEAYIARTDTYIEKDMAINDRIDKLR
LSATRSLLERRDVIIVASVSCIYGLGSPEYYREMNLTLETGQTRRRDEILLHLVEMQYKR
NDMDFSRATFRVRGDVLDIFPAYEEERAVRIEFFGDEIEQISEIDPLLGKVRHRLEKITI
YPSSHHVTPEEVRLHALETIKAELEERASYYEKEKKYIEHQRIVERTRYDLEMIKEIGFC
KGIENYSRHFSKRNPGDPPPCLIDYFPHDYLMIIDESHQTVPQLRAMCNGDRARKETLVN
FGFRLPSAFDNRPLQFEETYKRIHQVIYVSATPSPWEVAEASGEVIEQVIRPTGLLDPEI
EVRPAEGQVDDCLAEIHQHTSKGGRVLVTTLTKRLSEELSKYLNELGVHTKYLHSDIDTI
ERMQIIRDLRAGVFDVLVGINLLREGLDIPEVSLVCILDADKEGFLRSETALIQTCGRAA
RNSEGRVIMYADKKTKAIQEALRITQERRAIQQKYNAEHGITPRTVHREISPLVEEVEEE
SKKRKKTLKVAESQHEYLTLEEVRAKIKMLEVAMKRAAKTMQFEEAAELRDQMRRYQQME
IDLA
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaactagtgactgattatgagccttgtggagatcaacctcaagctatagaaaag
ctgagtgaaggcgttctgcaggaacgcaaaacgcaagttttgttaggcatcacagggtcg
ggtaaaacatttacgattgctaatgtgattgctaggacccagcgacctgctttaattatt
gctcataataaaactttagcagcgcagctttatcaagagtttaagaccttttttccccat
aatgctgtagaatattttgtctcctactatgattactatcagccggaagcttatatagct
cgtacagatacttatattgaaaaagatatggctatcaatgatcgcatagataaattgcga
ttaagtgctacacgctctcttttagaaaggcgcgatgttatcattgtggcctccgtttct
tgcatttatggcttaggttcgcccgagtattatcgcgaaatgaatcttaccttagaaaca
ggtcaaacgcgtcgtcgtgatgagattcttctacatctggtagaaatgcaatacaaacgc
aatgatatggacttttcgcgggctacttttcgtgttagaggagatgtgttggatattttt
cctgcctatgaagaggagcgggcagtacgtatagagttttttggggatgagatcgaacag
attagcgagatagatcctttattaggtaaagtgcgacatcgtcttgagaaaattactatt
tatcctagttctcaccacgtcactcccgaagaagttcgtttgcatgctcttgaaacgatt
aaggccgaattagaagaacgtgccagctattatgaaaaagaaaaaaaatatattgagcat
caaaggattgtagagcgtacacgctatgatctagaaatgattaaagagattggcttttgt
aagggtattgaaaattattcacgccattttagtaagcgtaatcctggcgatccgcctcca
tgtctcatcgattattttccccatgattatctaatgatcattgatgaatctcatcaaact
gtgccgcagctacgtgccatgtgtaatggagatcgtgcgcgcaaagaaacgttggtcaac
tttggctttcgtcttccttctgcttttgacaacagacctttgcaatttgaagaaacttat
aagcgtattcatcaggtgatctatgtttccgcgacccctagtccctgggaagttgctgag
gctagcggcgaagtgattgagcaagtgattcgccccaccggcttacttgacccggagatt
gaagtgcggccggcagaggggcaagtagatgattgcttagcagagatacatcagcatacg
agcaagggcggccgtgtgcttgttaccactttgactaaacgtctatctgaggaactaagt
aaatatcttaacgagctgggcgtacatactaaatacttgcactctgatattgatacgatt
gagcgaatgcagatcatccgcgatttacgggctggagtatttgatgtgttagtcgggatt
aacttattgcgggaaggtttagatattccagaggtttccttagtgtgcatattggacgcc
gataaagaaggcttcctacgtagcgaaacggcgttaattcaaacttgtggcagagccgct
cgcaatagtgaaggacgcgtcattatgtatgctgacaaaaagaccaaagcgattcaagag
gcgttaagaattacccaagaacgtcgcgctatccaacaaaaatataatgcagaacatggg
attactccacggactgtccatcgggaaatttcgcctttggtagaagaggtagaggaagag
tctaaaaaaagaaaaaaaactttaaaagttgccgaatcccagcatgaatatctcaccttg
gaagaggtgcgggctaaaataaaaatgttagaagtagctatgaaacgagcagctaaaacg
atgcagtttgaagaagctgcagagctacgtgaccaaatgcgtagatatcagcagatggaa
atagatcttgcctaa
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