Neochlamydia sp. S13: NCS13_1_1656
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Entry
NCS13_1_1656 CDS
T05849
Name
(GenBank) Putative type III secretion system protein SctD
Organism
ney
Neochlamydia sp. S13
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Ortholog
Paralog
GFIT
Motif
Pfam:
CdsD_PD2
Yop-YscD_cpl
FHA
CdsD_C
CdsD_PD1
Yop-YscD_ppl_2nd
T2SSB
Motif
Other DBs
NCBI-ProteinID:
BBI17851
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Position
2128652..2131069
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AA seq
805 aa
AA seq
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MVAKLVAEEGVQKGLVLSLDEGNEWVIGRDPDACQLLIEDPSASRKHLLCRQTPEGIVIQ
ALSLTHPVYVNEQPIQESWLLHHGDRVQIGEGLYRFYAEGDTQWIDEEKKTLLNGHEEIN
DSALENLSENAESEKALPTLEDEHSSQLFASQSPLSEAKEAEAEENLPSSAREHEQPLGK
EDEQSAKDPAAFASTPFNEEEDFFAPLEENKEKASEQEKKFSEEEEPSKDQSAEDKDKTA
LPLADDKDASPQELESDDEFLGVPPEQEGEQEGMSDSLAERQGALDTPNTSKEDEKQIMN
DSPASQLFQEASHSEDQQNEEDISIFEEPLETANYPEIHFDLAETGRWLIKVVGGPNHGA
EFTLQPSCTYIIGTDPNSCDIVFHDTSVSRQHAKITVTEEDTISLEDLGSRNGTFVDGKP
LTGRESVPTNTLILMGTSSFVVYDREGEMQTIIAPLLPSIVKTLKEDPQELPPPPASETE
AAVEEVPAAAPPVIAPPPNKVYPHEALGAFILIAIITGLFVVIGIGTATLFKSKPVVSQQ
VINPERDLTEALSAFPHVKYSFNRNTGRLLLVGHVLSGSDKTQLLYNLQGLPYLRSIDDS
GVIIDEGVWREINQILSQNSNWKGISIHSPTPGHFVISGYLKSRKQAEQLWDYIASNFPY
LDLLEKRVIVEEDAVSAISALLQNQGFKDVSSQMNEGEVILSGHIPAGKMNDYSQTLINI
KEIPGVRTIKNFVAELAPEQSMINITDRYEITGVSHQGDVNTNVVINGRILTRGDVLDGM
TIISIKPTAVFLEKEGVKYRIEYNR
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggtcgctaaattagttgcagaagagggtgtgcaaaaaggtcttgtactctccttagat
gaaggaaacgaatgggtaataggtcgtgatccagacgcttgccagctgcttattgaagat
ccttctgcttcacgtaaacatctactctgtcgccaaactcccgaagggattgtaattcaa
gctttaagccttacccatcccgtgtatgttaacgagcaacctatccaagagtcctggcta
ctacaccatggagatagggttcaaataggagaggggctttatcgtttttatgcagaaggc
gacactcaatggatcgatgaagaaaaaaagactcttcttaacgggcatgaagaaataaat
gattccgccctagaaaacctttctgaaaatgcagagagtgaaaaagctttgcctacatta
gaggacgaacactcttctcagctttttgcatctcagtctccactcagtgaagccaaagag
gcagaagcagaagaaaatcttccatcctccgcacgggagcacgaacagccactaggtaaa
gaagatgagcagtccgcgaaggatcctgcagcttttgcttctactccctttaatgaagaa
gaagactttttcgctcctttagaggaaaataaagaaaaagcttctgagcaggaaaaaaaa
ttctcagaggaagaggagccttctaaagatcaatcagctgaagacaaagataaaaccgcg
ttaccgcttgctgatgataaggatgcttctccacaagaattggaaagtgatgatgagttc
ttaggagtcccgccggaacaagaaggagagcaagaaggaatgagtgactctttggcagaa
aggcaaggtgctttggatacacctaacacttctaaggaagatgaaaaacagataatgaat
gattccccggcctcacagctattccaagaagccagccactctgaagaccagcagaatgag
gaggatatttctatttttgaagagcctctagaaacggctaattatcctgaaattcacttt
gatttagctgaaacaggccgttggctgattaaagtggtaggaggtcctaatcatggagcc
gagtttaccctacaaccttcttgtacttacatcattggaactgatcctaatagttgcgac
atagttttccatgatacgagtgtttcacgccaacatgctaaaattacagtaacggaagaa
gatacgataagtttagaagacttaggaagtcgcaatggaacgtttgtagatggaaagcct
ttaacaggtagagaatctgttcctaccaatactttaattcttatgggtacctcctctttt
gtggtttacgaccgggaaggtgaaatgcaaacaattattgctcctttactcccttcaata
gttaaaactctaaaagaagatcctcaagaattgcctcccccccctgcgagtgaaactgaa
gcagctgtcgaagaagttccagcggcagcacctcctgtaatcgctcccccccctaacaag
gtatacccccatgaagctttaggagcttttattttaatcgctatcattacaggcttattt
gttgtcattggaattggcacagcaactttatttaagagtaaacctgtggtctcccaacaa
gttattaatcctgaacgtgaccttacagaagccttatcggctttcccgcatgtcaaatac
tcttttaatcgtaatacaggacgtctacttcttgtgggccacgttttatctggatcagat
aaaacacaacttttatataacctccaaggccttccctatctacgtagcattgatgacagt
ggtgtgattattgatgaaggggtttggagagaaattaaccaaatactttcacaaaactct
aattggaaaggcatttccattcattcacctacccctggtcattttgtcatctccggctac
ctaaaatctagaaagcaagccgagcagctgtgggattatattgcctctaatttcccctac
cttgatctgttggaaaagcgcgtgatcgttgaagaagatgccgtttctgcgataagtgcg
cttttacaaaaccaaggttttaaagatgtatcctctcaaatgaatgaaggagaggttatt
ctttcaggccatattcccgccggaaaaatgaatgattacagccaaaccctcattaatatt
aaagaaattccaggtgtacgcacgattaaaaattttgttgccgagctagcacctgagcaa
tcgatgatcaatatcaccgatagatatgaaattacaggcgtctcgcaccaaggtgatgtg
aacaccaatgtggtaattaatggccgcatacttacgcgaggagatgttttggatggaatg
acaataataagtattaagcctaccgctgttttcttagaaaaagaaggggtcaagtatcgt
attgagtataatcgctaa
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