Neochlamydia sp. S13: NCS13_1_1795
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Entry
NCS13_1_1795 CDS
T05849
Name
(GenBank) Uncharacterized protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ney
Neochlamydia sp. S13
Pathway
ney03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ney00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCS13_1_1795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ney03400
]
NCS13_1_1795
Enzymes [BR:
ney01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NCS13_1_1795
DNA repair and recombination proteins [BR:
ney03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCS13_1_1795
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
BBI17990
LinkDB
All DBs
Position
2301900..2305406
Genome browser
AA seq
1168 aa
AA seq
DB search
MKSFDVLHRSLNLRQHYLLEASAGTGKTFSIENIVIRLLIEEDAGVQEPSLLEQILVVTF
TRAATRELKTRIRNKIEDSLSLLQKSSKDEACDYLQAIMEQGDAQVEKAKRRLEHALATF
DQAQIYTIHGFCLRMLTNFLFESDFSMHKGSFEQRSLTKQELLQLIRDFFRTEIRPHIFS
PVQLQIVLQAHGNRLEKVQEALLKYLTKECEVAATPDFSSDVEKFCTIMRTLKKERGWLP
EKMQEDVERQISFYKSIRNKSTSSIHAFIELFRKDSWNADDFDLLLKEGLFICEFLAPTN
LNKKKSNNLPKNSSLNYPELVPILTQSLYPLIQQAKSYEFIFARLVFYCRLLMHKYLSEE
EKHQENDLLKHMLKAIHSPSFAGKVRSLYQAAIIDEFQDTDPVQWQIFNTLFLENSTCKI
YLVGDPKQSIYAFRQADIYTYLSAGKSLGLANRASLDTNYRSQPSLVQALNTLFKACPGL
FSLPSLAENAYLDYSEVKFSPHIKERKFSDEQGSIHFFQAPVGSKSTQRFPSEECEEKFF
FPFIAQEITRLHNSDGFKFNQFAILIKDRFQGQRLAYYFDRHHIPYHLQKQTSLTESIAW
ESLRELLVGILNPRNENCVKIALGGPILGWNYNEIKKLEDPNFLERILAEFYAFKRHLSQ
EGFPIFFQRIMQSIGPMDSLSVAERLMKREGGDIFYDELTQIAYLLMEYQNEHPASPEHL
IAFLDEYKNMGVEDEERLKKVTDPSREAVSILTTHSSKGLEYDIVFAYGLVGRTQARDRL
IPQKEGTSHYLVPCLEKHSASYVKYCEEMDAEKMRQLYVAMTRAKYRLYIPVAVSDKPTE
IECGGASPMDIFLARLGQENCSYQELYSRIKEGDSYRLQNFIQAYPEAHITYSLLKETFD
EVAPLKNQNIPPLVAPPSVEIPGEKNFIQSFTSLTRYKKALASRDPYSLEPANAVPHNFQ
APCKNAHTLPSGNITGKLLHKILEIIPFSVVNKIASANDLKSWIHPLIQETEFHSWEKVL
CEITYEALQIKISENFCLKDIHPSLLYRETEFLYPSAKEMLVEELQWHKGFFKGVIDLIF
FHNHHYYILDWKSNWLGPNIEAYDFEKMKAAMEQHDYYFQAHIYCEAVKRYLKLVDKRPF
EEIFGGCFYIFLRGLSASTGKHTGVLKI
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgaagagttttgatgtccttcatagaagtttaaatttacgccagcattatttacttgaa
gcctcggcaggtacgggtaaaaccttttccatcgaaaatattgtaatacgcttgttaatt
gaagaagatgctggggtacaagagccttctcttcttgaacaaattctagtggttacattc
acacgagcagctactcgtgagctaaaaactagaattagaaataagatagaagattcctta
tcccttcttcagaaatcctctaaggatgaagcttgtgattatttacaggctatcatggaa
caaggagatgcccaagttgaaaaagctaagcggcgcttagaacatgcactggccactttt
gatcaagctcaaatttatacaatccatggtttctgcctgcgcatgttgactaacttttta
tttgaaagtgactttagcatgcataaaggctcctttgaacaaagatctttaacaaaacaa
gaacttcttcaacttattcgtgatttcttccgtacagagatacggccccatatttttagc
cctgtacaattacagattgtgctacaagcccatggcaatcgcctagaaaaagttcaagaa
gccttattaaaatatttgacaaaggagtgcgaggtagcagctactcctgatttctcctca
gacgtggaaaagttttgcaccatcatgcgaactttaaaaaaagaaagaggctggctacct
gagaagatgcaagaagatgttgaacgccaaataagtttttataaaagcattagaaacaaa
agtacaagctctatccatgcttttattgagttatttaggaaagatagctggaatgctgat
gattttgatctcttacttaaggagggattatttatttgcgaatttcttgcccccactaat
cttaataaaaagaaatccaataaccttcctaaaaattcttcattgaattaccctgagcta
gttccaattcttactcaatcgctctatcccctgatacagcaagcgaaaagctatgaattt
atatttgcccgcctagttttctactgccgcctgttaatgcacaaatatctctccgaagaa
gaaaaacatcaggaaaatgatttacttaagcatatgcttaaggccatccattccccctcc
tttgcaggtaaagtacgctccctttatcaagctgccattatcgatgagtttcaagatacc
gatccggtgcaatggcaaatctttaacacattatttttagaaaattctacctgcaaaatt
tatttagtcggtgaccctaaacaatctatttatgcttttaggcaagcagacatctacact
tacctttctgccggaaaatccttaggccttgcaaatcgagcctctttagatactaactat
cgttctcaaccctcgctagtacaagctttgaatactctatttaaagcatgcccaggatta
ttttctttaccttccctagcggaaaacgcctacttggattattctgaagtcaaattttcc
cctcacataaaggaaagaaaattttcagatgaacagggtagcattcatttctttcaagcc
cccgttggttctaagtcaacccaaagattcccctctgaagagtgtgaagaaaagtttttc
tttccttttatagcgcaagaaatcacacgtctccacaattcagacggctttaaattcaac
caatttgccattttaattaaagatagatttcaaggtcagcgcttagcctattattttgat
cgtcatcatattccctatcatttgcaaaagcaaacctcattgacagaatccattgcttgg
gagagccttagagaattattagtagggatattaaatccacgcaatgaaaactgcgttaaa
attgccttaggaggccccatattaggatggaattataatgaaattaaaaaattagaagat
ccaaattttttagagcgtatcttagctgaattttatgcatttaaacgccatttatctcaa
gaaggttttcctattttttttcagcgcatcatgcaatctatagggcctatggatagctta
agcgtagctgaaagacttatgaaaagagaaggcggagatatattttatgatgagcttact
caaattgcctacctgctaatggagtatcaaaatgagcatcccgcaagccccgagcatctg
attgctttcttagatgaatataaaaacatgggggtagaagatgaagaacgccttaaaaaa
gttactgatcccagccgtgaagctgtctctattttaaccacgcatagtagcaaaggttta
gaatatgatatcgtctttgcttatgggctggtgggtcgcacacaagcaagagatcgcctg
attcctcaaaaggagggaacctctcattacctagtcccttgcttagaaaaacattctgct
tcctatgttaaatattgtgaggagatggatgcagaaaagatgcgtcagctgtatgtagct
atgacgcgggccaaataccgcttgtatatacctgtagctgtgagcgataagcccaccgaa
atagagtgtgggggggcctctcctatggatatcttcttagcacgcttaggacaagaaaat
tgcagttatcaagagctttacagccggattaaagagggtgatagctatcggttacaaaac
tttatccaagcttatccagaggcccacattacctattccctattaaaggaaacatttgat
gaagtagcgcctctaaaaaatcaaaacattcctcctcttgtggctcctccttctgtagag
attccaggggaaaaaaactttattcaatcttttacctcccttacacgttacaaaaaggct
ctagcaagcagagatccttactctttagagcccgctaacgcggtgcctcataattttcaa
gctccttgcaagaatgcacacacccttccctctggaaatataacaggaaaactactgcat
aagattttagaaattatacctttttcggtagtaaataaaattgcttctgctaacgattta
aaaagctggattcatccattaattcaagagactgagtttcattcttgggaaaaagtactt
tgcgaaatcacctatgaggctttgcaaataaaaatcagcgagaatttttgtcttaaagat
atacacccttccttgctttaccgtgaaacagaatttctttatccgagtgcaaaagaaatg
ttggtagaagagcttcaatggcataaaggtttttttaaaggagtcattgacctcatattt
tttcataatcatcattattacattctggattggaaaagtaactggctaggtcctaacatt
gaagcctatgactttgaaaagatgaaagcagctatggaacagcatgattactattttcaa
gcacatatttattgcgaagctgtaaagcgttacttaaaactagtagacaagcgacctttt
gaagaaatttttggaggatgtttttacatctttttacgcggacttagtgcaagtacagga
aaacatacaggtgtcttaaaaatttga
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