Neochlamydia sp. S13: NCS13_1_1796
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Entry
NCS13_1_1796 CDS
T05849
Name
(GenBank) Putative exodeoxyribonuclease V alpha chain recD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ney
Neochlamydia sp. S13
Pathway
ney03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ney00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCS13_1_1796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ney03400
]
NCS13_1_1796
Enzymes [BR:
ney01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NCS13_1_1796
DNA repair and recombination proteins [BR:
ney03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCS13_1_1796
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Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
NAT10_TcmA_helicase
DEAD
PhoH
nSTAND3
AAA_22
SH3_13
RecD_N
ResIII
SLFN-g3_helicase
STAT1_TAZ2bind
Motif
Other DBs
NCBI-ProteinID:
BBI17991
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All DBs
Position
2305463..2307211
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AA seq
582 aa
AA seq
DB search
MQSSQNINLIDKLKNNQALPLVDFALADYLIKSYNASVDTLPLLLHLSQSTRAGHLCIKV
SDAEVLPKPQDVWEVQEQNHFSPEEWQELERLISRSTHHIPPSLLHLITETEDIVPPTPL
CRLNDLFYFQKYWLYEHCCLREFHRLLEQKASLELDKALFQANLAHLLSTNNLLPEQAQA
IAQLENQSLTIICGGPGTGKTYTAGLLIKVFWNSLNNIQKDNCRIALAAPTGKAAAQLQK
SLSKAVSDLEGFSPINATTIHSLLGLKSKSLSSTAPLINADLLVIDESSMIDIRLMSLLF
QALKPGARLIMLGDPYQLPPIEAGSFFADMTCLCKPHQFIELKKCLRSELEEIIDLAEEI
KKGESQAALQRLQSSKKALHFVRLSKDLPAFSVQQQLWLKVEPYLSWEESNISELSMNHF
RILSPLRKGPLGVDQLNAFFYQEILKKTKVHQRMIIPIIITTNDSTRDLYNGDVGFLIRQ
KPHQLEGHVQAGDYALFADKKIPALLLPSYEYAYCLSVHKSQGSEFNHLILLLPEGSEHF
GRELIYTAITRARQQIEIWSQTDTFEKALNKSTSRLSRCSKK
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcttcacaaaacatcaatctaatagataagcttaagaataatcaagcactcccc
ttggtagattttgctttagcagattatttaattaaaagctataatgcctctgtagacacc
ctaccgctccttcttcatctctctcaatcgactcgagcaggtcatttatgtataaaagtt
tctgacgctgaagttttacctaaacctcaagatgtatgggaagttcaagagcagaatcat
ttctccccagaagaatggcaagaattagaacgattaattagccgcagtacccaccatatc
cctccttctttactccaccttattacagaaacagaagatatagttcctcctactccttta
tgtcgcttaaatgatcttttctattttcaaaaatattggttatacgaacattgttgctta
cgagaatttcatcgccttttagagcaaaaagcttctcttgagcttgataaagcacttttc
caagccaaccttgctcaccttttatctactaacaacttacttcctgaacaagcccaagct
attgctcaactagaaaaccaatcattaacgattatttgcggtggacctggaaccggtaaa
acttatacggcgggtttacttattaaggtgttttggaatagcctgaataatattcaaaaa
gataattgccgtattgctttagctgcccctacaggaaaagctgccgcgcagctacagaaa
agcttaagtaaagcagttagtgatctggaaggtttctctcctatcaatgctaccactatt
cattctttactcggccttaaatcaaaaagcctatcttctaccgcccctctcattaatgct
gatttattagtgattgatgaatcttctatgattgatattcgtttgatgtctttacttttt
caagcacttaagcccggtgctcgtcttatcatgcttggagatccttatcaattgccccct
attgaagcaggttctttttttgcagacatgacctgcctttgtaaacctcatcaattcatt
gaactaaaaaaatgcctacgctcagagttagaagaaatcattgacttagccgaggagatc
aaaaaaggagaaagccaagcagctttacaacgcttacaatcttcaaaaaaagctctacac
tttgtaagattaagcaaagatctgccagctttttctgttcagcagcagctatggttaaag
gtagagccttatttatcatgggaagaatcaaatatttccgaattatcaatgaaccatttc
cgtattctttcccctcttcgaaaaggacccttaggagtagatcagctgaatgcttttttc
taccaagaaattttaaagaagactaaagttcatcaacgcatgattattcctataatcatt
accactaatgattctaccagagatctatataatggagatgtaggctttcttatcagacaa
aaacctcaccaactcgaaggccatgtgcaagcaggggactatgccctatttgctgataaa
aaaatacctgcccttctattacccagttatgaatatgcttattgcttatctgtacataag
agccagggtagtgaattcaatcatttgattttattgcttcccgaaggtagtgagcatttt
ggtcgagagctcatctatacagccattacccgtgcacgccaacaaattgaaatctggagc
cagacagacacttttgaaaaagcattaaataaatccacctccaggctctcaagatgctct
aaaaaatga
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