Neochlamydia sp. S13: NCS13_1_1892
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Entry
NCS13_1_1892 CDS
T05849
Name
(GenBank) Probable ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ney
Neochlamydia sp. S13
Pathway
ney03420
Nucleotide excision repair
ney03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ney00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCS13_1_1892
03430 Mismatch repair
NCS13_1_1892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ney03400
]
NCS13_1_1892
Enzymes [BR:
ney01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCS13_1_1892
DNA repair and recombination proteins [BR:
ney03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCS13_1_1892
MMR (mismatch excision repair)
Other MMR factors
NCS13_1_1892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_14
Bep_C_terminal
Ecotin
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BBI18087
UniProt:
A0A3T1CCS4
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All DBs
Position
2431414..2433594
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AA seq
726 aa
AA seq
DB search
MTLLSQLNEEQLGAVNAIEGPILVLAGAGSGKTRVVTSRIASLIEMGVPTSQILGLTFTN
KAAEEMRERIRILVGRQAPLLCTFHSLGARILRESIQALGYERDFTIYDEEDIHKVLQAC
LAELEIKDKKMDTKTFRGLISKAKNALQRPEDIKVSYMSSPAEEYLSRVYSLYQTKLKHY
NAVDFDDLLFLVVRLFQEHPDKREQYQDRWTFLSIDEYQDTNEAQYKILNYLVQKHGNLF
VVGDPDQSIYSWRGANINNILNFEKDYPGAQIFRLQQNYRSCSNILEAANAVIAHNANRY
EKQLWSDLGKGEKIKFYASDTERDEADFVADKIRQHREQGIPYNEIVVFYRTNNQSRAFE
DYFLYRQIPYVIVGGLSFYQRREIKDILSFLRMVYSGTDYISFLRSLNIPRRGIGAATLE
KIRLAASKEQLSILAYCEAIAEDKGLQHPIKLATKQKEALKQYLGIIYRLREVAKSASLQ
ELVRAAIDETDYLQFLAEDPESFEDRKGNLDALITKAIEWEQTAVDATLRAFLEELTLKS
SLDEADTKKDRVSLMTIHNGKGLEFKVVFLVGIEEDLFPHVNSKDKLEALEEERRLFYVG
MTRAKECLYLTHSQYRYMWGMARHQLPSRFMREVPREYLERIHPSPLPTFRPKDYPEEKG
EPSINGGEDQSFDHYEIGAAIFHQEFGIGIIREVYQSSLGLTYKIFFSKDNRERSIVAKY
AKLKML
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgactttattatctcagctaaatgaagagcaacttggggcagtgaatgctattgaaggc
cctattctggtattagcaggagcaggttcaggaaaaacacgggttgttacttcgcgtata
gcctctttaattgaaatgggagtcccaacttctcaaatcctaggtttaacttttactaat
aaagctgctgaagaaatgcgcgagcgtattcgcatcttagtaggaaggcaagcccctctt
ctatgtacttttcatagtttaggagccagaattttacgtgaatctatccaagctttaggg
tatgagcgtgactttaccatttatgatgaagaagacatccataaagtgcttcaagcttgc
ctagcggagttggaaattaaagataaaaagatggatactaagacctttcgaggattgatt
tcaaaagctaaaaatgctttgcaaaggccggaagatattaaagtcagttatatgtcttca
ccggccgaggaatatctttctcgtgtttattctctctaccaaactaagttaaaacattac
aacgccgtagattttgatgatcttctttttttggtagtaaggctttttcaagaacatccc
gataagcgtgaacaataccaggatcgatggacatttttatctatcgatgaatatcaagat
accaatgaagctcaatataaaattttaaattatttagtgcaaaagcacggcaatttattt
gtggtaggggacccggatcaatctatctattcctggcggggagccaacattaataatatt
ttaaattttgaaaaagattatcctggtgctcagatctttcgcctacaacaaaactatcgt
agttgtagcaatattttagaagcggcgaatgctgtgattgctcataatgccaatcgctat
gaaaaacagctgtggagtgatttaggtaaaggagaaaaaataaagttttatgctagcgat
actgagcgtgatgaagcggattttgtagccgataaaattcgccagcatcgtgagcaaggc
attccctataatgaaatagtagtgttttatcgcaccaataatcaatcacgcgcttttgaa
gattattttctatatcgccagatcccctatgtgattgtaggaggtttatctttttaccaa
agacgcgaaattaaagatattttatctttcttgcgtatggtttattcagggaccgattat
atttcttttttaaggagcctcaatatccctcgcagaggaataggagcagctactttagaa
aaaattcgcctggcagcctcgaaagagcaattgtcaattttagcttattgcgaagctatt
gctgaagataaaggtttgcagcatcctattaagctagctactaagcaaaaagaagcttta
aagcaatatttagggattatctatcgtttgcgagaagtggctaaatcagcttccttacaa
gaattagtgcgggctgccatagatgagaccgactatcttcaatttttagctgaggatccc
gagtcttttgaagatcgtaaagggaatttggatgctttaattaccaaagcaattgaatgg
gaacaaaccgctgtcgacgcgactttaagggctttcttagaagagcttaccttaaagtct
agcctagacgaggccgataccaagaaagatcgcgtaagcttaatgactattcacaatgga
aaaggattagaatttaaagtcgtttttttagtgggaatagaagaggatttatttcctcat
gttaattctaaagataagcttgaggctttagaagaagaacgacgtcttttctatgtagga
atgacgcgtgccaaagaatgtttatatttaacacactcccaatatagatatatgtggggc
atggcacggcatcagctccctagtcgttttatgcgtgaggtgcccagagaatacttagaa
cgtatccatccatcgccacttccaacttttagacctaaagactatccggaagaaaagggc
gagccaagcataaatggaggcgaggatcaatcgtttgatcactatgaaataggagctgct
atctttcatcaagagtttgggatagggatcattcgtgaggtttatcaaagttctctaggg
cttacctacaaaatctttttttctaaagataatcgcgaaagaagcattgtcgctaaatat
gctaagcttaaaatgttataa
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