Neochlamydia sp. S13: NCS13_2_0057
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Entry
NCS13_2_0057 CDS
T05849
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ney
Neochlamydia sp. S13
Pathway
ney03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ney00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCS13_2_0057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ney03019
]
NCS13_2_0057
03009 Ribosome biogenesis [BR:
ney03009
]
NCS13_2_0057
Enzymes [BR:
ney01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCS13_2_0057
Messenger RNA biogenesis [BR:
ney03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCS13_2_0057
Ribosome biogenesis [BR:
ney03009
]
Prokaryotic type
rRNA helicases
NCS13_2_0057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BBI18254
LinkDB
All DBs
Position
pS13:complement(73576..74742)
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AA seq
388 aa
AA seq
DB search
MTLFENMNLDPLILKSLERMQYKQPSAIQVQTIPLILQGKDLIALSKTGSGKTAACAIPI
CNKVNPDSPHVQALIIVPTRELAMQYATETQKIGYEKKVKAFAIFGGEDATMQQTKLKSG
VQVLVATPGRLIDFIYSRQIDLTQVDILVLDEADEMLGMGFYDDLAFIINCLVHEHQTLL
FSATMQEEIRSMAKKHMKAPQEISLLSDEVSPESIEHRFLYCRYDQRDQALLSLLEELKP
KQTIIFCHSRIQCEKVCRTLQRKIADVDLLHAGLGQDVRSIITNKFRHGKIRYLVATDIA
ARGLDFSNITHVFIYQLSDSPDVYVHRSGRTGRQERAGVVVTLVTEKELKSLSRVLHHIR
RKPIWIGNPPPERNHPRKRAVAHKNNKS
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgacattatttgaaaatatgaacttagatcctttgattcttaaatctcttgaaaggatg
caatacaaacaaccttctgctattcaagttcaaactatccctttgatactgcaaggaaaa
gatcttatcgccttgtctaaaacaggctcaggtaaaacagccgcatgtgccattccgatt
tgtaataaagtaaatcctgactctcctcacgtacaagctcttatcattgttcctacgcgt
gaacttgccatgcaatatgcaactgaaactcaaaaaattggctatgaaaaaaaagtgaaa
gcttttgctatttttggaggggaagatgcgaccatgcagcaaactaaactaaaatctggc
gtgcaagtgttagtagctacaccagggcgtttgattgactttatctatagccggcaaatc
gacttgacacaagtagatatcctagttctagatgaagctgatgaaatgctgggcatgggt
ttttatgatgacctggcctttatcattaattgcctggtccatgagcatcagacgctatta
ttttctgcgacgatgcaagaagagattcgtagcatggcaaaaaaacatatgaaagctcca
caagaaatctctttgttgtctgatgaagtctctccagagtccatagagcatcgcttttta
tattgccgttacgatcagcgggatcaagctttacttagcctactagaagaattaaaacct
aagcaaaccattatcttttgccattcaagaatccaatgcgaaaaagtttgtcggacgttg
caacgtaaaattgcggacgtcgatttattgcatgcgggattggggcaagatgtgcgttct
ataattacaaacaagtttcgccatggtaaaattcgttatctagtagctaccgatattgcg
gcaagaggtttagatttttctaatattactcatgtttttatttatcaactttctgatagc
ccggatgtctatgttcatcgctctggccgtacggggcgccaagagcgtgcaggagttgtc
gttactttagtgacagaaaaagagttaaagtctttaagccgtgtcctccatcatattcga
cgtaagcctatctggatagggaatccccctccagagcgtaatcaccctagaaaacgggcg
gttgctcataaaaataataaatcatag
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