Nocardia farcinica IFM 10152: NFA_10310
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Entry
NFA_10310 CDS
T00207
Name
(GenBank) putative helicase
Organism
nfa
Nocardia farcinica IFM 10152
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
DEAD
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
BAD55876
NIH_Japan:
nfa10310
UniProt:
Q5Z115
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All DBs
Position
1133195..1136065
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AA seq
956 aa
AA seq
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MVGAGGPPGVGATCLDGRMLHGLWSPGSGLVLWTEGEVPPALPDPAGALLRASRFRHRAQ
VLVPGPAGPQLTQVRAHALVPQAAVDVLRQRLPVESVAGDLRFLAHVADGIDRWVRAGRV
VPDLHRADGQWWARWRLVGGARQRAWLAELAVAMPAALRVAGQPAAVLDDLVTELTDPIV
RTRLADAPVTHPLVRALVRDQPLETGSHQLAEVLRRWRESLTVDEPELVLRLLEPDGETG
IDGDGGDDRDDTVALWRLEVCLRTEGEAPAPVPATADPNLLRIAVEQLGRAQRAYPRLRD
LPGDPHSLDLLLPTEVVADLVAHGAQALREAGVRLLLPRAWTIAEPTLRLAVSSAAPAAE
STVGMQGLLSYRWELAVGDKVLTRAEMERLVRAKSDLVQLRGEWVQADHKVLAAAARYVA
AHLDTSPVTLADLLGEIAATRVDKVPLTEVTATGWAGELFDGGREPVATPGGLKAQLRPY
QLRGLSWLATMSRMGCGGILADDMGLGKTVQVLALLVHERETSTAPPGPTLLVCPMSVVG
NWQREAQRFAPGLRVLVHHGADRRRDAELDAAVADSDLVLTTYAILARDAAELSRQSWDR
VVLDEAQHIKNAATRQARAARALPARHRLALTGTPVENRLEELRSIMDFAVPKLLGTAPT
FRARFAVPIERGQDPNALSRLRFLTQPFVLRRVKADPAVIGDLPDKLEMTVRANLTVEQA
ALYQAVVDDMLVKLRSAKGMARKGAVLGALTRLKQVCNHPAHFLGDGSPVLHRGRHRSGK
LALVEDVLDTVVADGEKALLFTQFREFGDLLAPYLSERFGAPIPFLHGGVTKKNRDTMVE
RFQSGDGPPVMLLSLKAGGTGLTLTAANHVVHLDRWWNPAVENQATDRAFRIGQRRDVQV
RKLVCVDTIEERIDEMITGKSRLADLAVDAGENWITELGTEELRELFTLGAEAVGE
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcgccggcggcccgccgggtgtcggtgccacctgcttggatggacggatgctg
cacggactgtggtcgccgggttccggcctggtgctgtggaccgagggcgaggtgccgccc
gcgctgcccgacccggccggtgcgttgctgcgcgcatcgcggttccggcatcgggcgcag
gtgctggtgccgggccccgccggcccacagctcacgcaggtgcgcgcgcacgccctggtg
ccacaggccgcggtcgacgtgctgcggcagcggttacccgtcgaatcggtggcgggtgac
ctgcgctttctcgctcacgtcgccgacgggatcgatcggtgggtgcgggccggtcgcgtg
gtgcccgacctgcaccgggccgacggacagtggtgggcgcgctggcggctggtcggcggt
gcccggcagcgggcctggctggccgaactcgcggtggcgatgcccgcggcgctgcgggtg
gccgggcagcccgcggcggtgctcgacgatctggtcaccgagctgaccgatccgatcgtg
cgcaccaggctcgccgacgcgccggtgacgcacccgctggtgcgcgcactggtgcgggac
cagccgctcgagacgggtagccaccagctggccgaggtgctgcggcgctggcgcgagagc
ctcaccgtcgacgagccggagctggtgttgcggctgctggaaccggacggggagaccggt
atcgacggggacggcggggacgaccgggacgacaccgtggcgctgtggcggctggaggtc
tgcctccgcaccgagggcgaggccccggccccggtgccggcgaccgccgacccgaacctg
ctgcgcatcgccgtcgagcagctcggccgggcgcagcgggcctacccccggctgcgcgat
ctgcccggcgatccgcacagcctcgacctgctgttgcccaccgaggtggtggccgatctc
gtcgcgcacggtgcgcaggcgttgcgcgaggcgggggtgcggctgctgctgccgcgcgcc
tggaccatcgccgaacccaccctgcggctcgcggtgagcagcgccgcgcccgccgcggag
agcaccgtgggcatgcagggtctgctgtcctatcggtgggaactggcggtcggcgacaag
gtgctcacccgcgccgagatggagcgcctggtccgcgccaaatccgacctggtgcagttg
cgcggggaatgggtgcaggccgaccacaaggtgctcgccgccgccgcccgctacgtcgcc
gcgcatctggacacgtcgccggtcaccctcgccgacctgctcggcgagatcgccgccacc
cgcgtcgacaaggtgccgctcaccgaggtcaccgccaccggctgggcgggcgagttgttc
gacggcggccgcgagccggtggcgaccccgggtgggctgaaggcgcagctgcgcccgtat
cagctgcgcggcctgagctggctggcgacgatgagccggatgggctgcggcggcatcctc
gccgacgacatgggtctcggcaagacggtgcaggtgctggccctgctggtgcacgagcgc
gagaccagcacggcaccgcccggcccgacactgctggtgtgcccgatgtcggtggtcggc
aactggcagcgcgaggcgcagcggttcgcccccgggctgcgggtgctggtgcaccacggc
gccgaccgccgtcgcgacgccgaactcgatgccgcggtggcggattcggacctggtgctc
accacctacgccatcctggccagggatgcggccgaactgtcgcgccagtcgtgggaccgg
gtggtgctcgacgaggcgcagcacatcaagaacgccgcgaccaggcaggcacgtgccgcc
cgtgccctgccggcccggcatcgcctggcgctcaccggaaccccggtggagaaccggctc
gaagagttgcgctcgatcatggatttcgcggtgcccaagctgctcggtaccgcaccgacc
ttccgcgcccggttcgccgtccccatcgaacgcgggcaggatcccaacgccctgtcccgc
ctgcgcttcctcacccaaccgttcgtgctgcgccgggtcaaggccgatccggcggtcatc
ggcgatctgcccgacaagctcgagatgacggtgcgggcgaacctgaccgtcgagcaggcc
gccctgtaccaagccgtcgtcgacgacatgctggtgaaactgcgcagtgccaagggcatg
gcccgcaagggtgcggtgctcggcgcgctcacccggctcaagcaggtgtgcaaccatccc
gcgcacttcctcggtgacggttccccggtgctgcatcgcggcaggcaccgctccggcaag
ctcgccttggtcgaggacgtgctcgacaccgtcgtcgcggacggggagaaggcgttgctg
ttcacccagttccgtgagttcggcgacctgctcgcgccctatctgtccgagcggttcggc
gcgccgatcccgttcctgcacggcggcgtgaccaagaagaaccgggacacgatggtcgag
cgcttccagtccggcgacggcccgccggtcatgctgctgtccctcaaggccggcggcacc
gggctcaccctcaccgccgccaatcacgtggtgcacctggatcgctggtggaatccggcg
gtggagaaccaggccaccgatcgcgccttccgcatcggccagcgccgcgacgtccaggtg
cgcaagctggtctgcgtcgacaccatcgaggaacggatcgacgagatgatcaccggcaag
agcaggctcgcggacctggccgtggacgcgggggagaactggatcaccgagctgggcacc
gaggagctgcgcgagttgttcaccctcggcgccgaggcggtgggggagtga
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