Nocardia farcinica IFM 10152: NFA_10480
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Entry
NFA_10480 CDS
T00207
Symbol
lysA
Name
(GenBank) putative diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa00300
Lysine biosynthesis
nfa00470
D-Amino acid metabolism
nfa01100
Metabolic pathways
nfa01110
Biosynthesis of secondary metabolites
nfa01120
Microbial metabolism in diverse environments
nfa01230
Biosynthesis of amino acids
Module
nfa_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NFA_10480 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NFA_10480 (lysA)
Enzymes [BR:
nfa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NFA_10480 (lysA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BAD55893
NIH_Japan:
nfa10480
UniProt:
Q5Z0Z8
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All DBs
Position
1156431..1157852
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AA seq
473 aa
AA seq
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MSAHPAGPRHAESSATPHLAQRPVDPKQMIELPANVWPRNATRDEAGQVRLAGVPVRELA
EQFGTPLFVVDEDDFRSRCRDMVRAFGPDARVHYASKAFLCGEIARWLRDEGLSLDVCSG
GELAIALHAGFPAERIALHGNNKSVAELEAAVAAGVGHVVVDSLIEIERLEAVAERAGVV
QDVLVRVTVGVEAHTHEYISTAHEDQKFGFSIAGGDAMEALARVFEASNLRLVGLHSHIG
SQIFEIDGFEIAARRMLGLLRAAIDTFGVERTAQISTLDLGGGLGISYLPEDNPPPLDEF
AAKLRAIVAEEAARAGLPEPTIAVEPGRAIAGPGTVTVYEVGTIKDVSLDAGLRRRYVSV
DGGMSDNIRPALYQADYDCRLVSRPSEAEAVLARVVGKHCESGDIVIRDTWMPADVGPGD
LIAVAATGAYCYSMSSRYNQLTRPAVVAVRDGSARLVLRRETVADLLSLEVES
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcgcaccccgccggtccccggcatgccgaatcgagcgccaccccccatctggcg
caacggccggtcgacccgaagcagatgatcgaactgcccgccaacgtctggccgcgcaac
gccacccgcgacgaggcgggccaggtgcggctggcgggtgtgccggtgcgcgaactggcc
gagcagttcggcacgccgctgttcgtggtcgacgaggacgacttccggtcgcgctgccgc
gacatggtgcgcgccttcggccccgacgcgcgggtgcactacgcctccaaggcgttcctg
tgcggggagatcgcgcgctggctgcgcgacgaaggcctctcgctggacgtgtgctccggc
ggtgagctggcgatcgcgctgcacgcgggctttcccgcggagcggatcgcgttgcacggc
aacaacaaatcggtcgccgagctggaagcggcggtcgccgcgggcgtcggccacgtggtg
gtcgactcgctgatcgagatcgagcggctcgaggcggtcgccgagcgcgcgggcgtggtc
caggacgtgctggtgcgcgtcaccgtcggcgtggaggcccacacccacgagtacatctcg
accgcgcacgaggaccagaagttcggcttctcgatcgcgggcggcgacgcgatggaggcg
ctggcgcgcgtcttcgaggcgagcaacctgcgcctggtcggcctgcattcgcacatcggc
tcgcagatcttcgagatcgacggcttcgagatcgccgcgcggcgcatgctcggcctgctg
cgcgcggccatcgacaccttcggcgtcgagcgcaccgcgcagatctccaccctggatctc
ggtggcggtctcggcatctcctacctgcccgaggacaacccgccgccgctggacgaattc
gccgcgaagctgcgcgcgatcgtcgccgaggaggcggcccgcgccggcctgcccgagccg
accatcgcggtcgagcccggccgtgccatcgccggaccaggcaccgtgaccgtgtacgag
gtcggcaccatcaaggacgtctcgctcgacgccgggctgcgtcgccgctacgtcagcgtg
gacggcggcatgagcgacaacatccggcccgcgctctaccaggccgactacgactgccgg
ctggtctcgcggccctccgaggccgaggcggtgctcgcccgcgtcgtcggaaagcactgc
gagagcggcgacatcgtcatccgcgacacgtggatgcccgccgatgtcggccccggtgac
ctcatcgcggtggccgccacgggcgcgtactgctattccatgtccagccggtacaaccag
ctgacgcgtccggcggtcgtcgccgtgcgcgacggcagcgcccggctggtgctgcgccgg
gagacggtggcggatctgctgagtctggaggttgagtcatga
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