Nocardia farcinica IFM 10152: NFA_1460
Help
Entry
NFA_1460 CDS
T00207
Name
(GenBank) putative transcriptional regulator
KO
K05596
LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
nfa
Nocardia farcinica IFM 10152
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfa03000
]
NFA_1460
03036 Chromosome and associated proteins [BR:
nfa03036
]
NFA_1460
Transcription factors [BR:
nfa03000
]
Prokaryotic type
Helix-turn-helix
LysR family
NFA_1460
Chromosome and associated proteins [BR:
nfa03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
NFA_1460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
P22_Cro
HTH_AsnC-type
MarR_2
HTH_24
HTH_28
Motif
Other DBs
NCBI-ProteinID:
BAD54988
NIH_Japan:
nfa1460
UniProt:
Q5Z3K3
LinkDB
All DBs
Position
134534..135436
Genome browser
AA seq
300 aa
AA seq
DB search
MIDLPLDQVRTLLAVVDTGTFDAAAAALHVTPSAVSQRIKALEQRTGRVLVLRTKPVRPT
ESGQVLVRFARQLAALERDTQRELGIAAGSDATYLPIAVNADSLATWFLPALTRVPQDPP
ICFDLHREDESHTAMLLREGRVMAAVTSAAEPVPGCTARPLGAARYLPVASPAFAERHLR
GEPGRRLPDAPVVVFDRRDELQDRFVRTLTAGRAAAGALRHHIPTSEGFCDAVTAGLGWG
LIPEPQAAPLLRSGQLTTAVPGRWADVPLYWQQWKLDVPALALVAETIATAAAESLHPWR
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacttgccgctcgaccaggtgcgcacgctgctcgccgtcgtcgacaccggcacc
ttcgacgcggccgccgccgccctgcacgtgacgccgtccgcggtgagtcagcgcatcaag
gcgctcgagcagcggaccgggcgggtgctggtgctgcgcaccaagccggtccgtcccacc
gaatccgggcaggtgctcgtgcgattcgcccggcaactggccgcgctggagcgcgacacc
cagcgggaactgggcatcgccgcgggctcggatgccacctatttgcccatcgccgtcaac
gcggactcgctggccacctggttcctgcccgcgctcacccgcgtcccgcaggatccaccg
atctgcttcgacctgcaccgcgaggacgaatcacacaccgccatgctgctgcgcgaaggc
cgggtgatggcggcggtgacctccgcggccgagccggtgcccggctgcaccgcccgcccg
ctcggtgcggcgcgctatctaccggtcgcgagtcccgccttcgccgagcgccacctgcgc
ggggagccggggcgtcgcctgcccgacgccccggtcgtggtcttcgaccgccgcgacgaa
ctccaggaccgcttcgtgcgcaccctcaccgcgggccgggcggccgcgggcgcactgcgc
caccacattcccacctccgaaggcttctgcgacgccgtcaccgcgggcctcggctggggg
ctgatccccgaaccccaggcggcgccgctgctgcgcagcgggcagctcaccacggcggtg
ccggggcgctgggcggatgttccgctgtactggcaacagtggaagctcgacgtgcccgcg
ctcgcgctggtcgccgagacgatcgccaccgccgccgcggaatcgctgcacccctggcga
tga
DBGET
integrated database retrieval system
