KEGG   Nocardia farcinica IFM 10152: NFA_1570
Entry
NFA_1570          CDS       T00207                                 
Name
(GenBank) putative sigma factor
  KO
K03090  RNA polymerase sigma-B factor
Organism
nfa  Nocardia farcinica IFM 10152
Brite
KEGG Orthology (KO) [BR:nfa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nfa03021]
    NFA_1570
Transcription machinery [BR:nfa03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     NFA_1570
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_23 HTH_Crp_2 HTH_3 E3_binding HTH_31 GntR DUF7343 Trp_repressor Sigma70_ECF HTH_26 HTH_Tnp_ISL3 Trypco1 CENP-B_N Apolipoprotein
Other DBs
NCBI-ProteinID: BAD54999
NIH_Japan: nfa1570
UniProt: Q5Z3J2
LinkDB
Position
146138..146938
AA seq 266 aa
MREEVTGGSTRAAAGGYQDLEPHFVELRALAEDDPRRRALREELIERCLPLAEHIARKFS
GRGENFEDLLQIARVGMVAAVDRFDPTQGAPFLGFAVPTIMGEVRRHFRDHTWSVRVPRR
LKELQATLNPAIETLTQRLGRMPKARELAEELGVDIAEVTQALVARNAYQTSSIDGSSGD
DGESSAPALADTLGAEDPEFGTVENYLAVKPLIAALPEREQRVLVMRFFHSMSQEQIAQQ
IGCSQMQVSRILSRTLKSLREQALRD
NT seq 801 nt   +upstreamnt  +downstreamnt
atgcgtgaggaggtgacgggcggttccaccagagcggcggcgggcgggtaccaggatctc
gagccccacttcgtcgaactgcgcgcgctggccgaggacgacccgcgcagacgcgcgctg
cgcgaggaactgatcgaacgctgcctgcccctggccgagcacatcgcccgcaagttcagc
ggccgcggggagaacttcgaggatctgttgcagatcgcccgcgtcggcatggtcgcggcg
gtcgaccgtttcgacccgacccagggcgcgcccttcctcggcttcgcggtgcccaccatc
atgggcgaggtgcgcaggcacttccgcgaccacacctggtcggtgcgggtgccgcgccgg
ctcaaggaactgcaggccaccctcaacccggccatcgagacgttgacccagcggctgggt
cggatgcccaaggcgcgcgaactggccgaggaactcggcgtcgacatcgccgaggtcacc
caggccctggtggcccgcaacgcctaccagacctcctccatcgacggttcgagcggcgac
gacggtgagtcgagcgcgcccgcgctggccgacaccctcggcgccgaggaccccgagttc
gggaccgtggagaactacctggcggtcaagccgctcatcgccgcgctgcccgagcgcgaa
caacgggtgctggtgatgcggttcttccactcgatgtcgcaggagcagatcgcccagcag
atcggctgctcgcagatgcaggtctcgcggatcctgtcgcgaacgctcaagagcctgcgg
gaacaggcgctgcgcgactga

DBGET integrated database retrieval system