Nocardia farcinica IFM 10152: NFA_17640
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Entry
NFA_17640 CDS
T00207
Symbol
murD
Name
(GenBank) putative UDP-N-acetylmuramoylalanine-D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa00470
D-Amino acid metabolism
nfa00550
Peptidoglycan biosynthesis
nfa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NFA_17640 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NFA_17640 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nfa01011
]
NFA_17640 (murD)
Enzymes [BR:
nfa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
NFA_17640 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
nfa01011
]
Precursor biosynthesis
Amino acid ligase
NFA_17640 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
TrkA_N
DUF3995
Motif
Other DBs
NCBI-ProteinID:
BAD56610
NIH_Japan:
nfa17640
UniProt:
Q5YYY1
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All DBs
Position
1919747..1921240
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AA seq
497 aa
AA seq
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MIRMVEHSPRALRSPGPMLEFLRGRDVLVAGWGISGRSLVEPLRDIGAHPVVTDSGAKAL
AEAAELGLEVATSVELESADLSRFALVITSPGWRPDSPVLVSAVTEGIPVWGDVEFAWWV
DQARIYGPVRKWLVVTGTNGKTTTTQMTHAILRAAGIASVACGNIGLPILDALRRNPGPQ
VLAVELSSFQLHWAPSVRPEAGVVLNVAEDHLDWHGGLDAYAAAKARALVGRIGVVGLDD
PVAAALARRSKARRTVGFRVGVPADGELGVVDGKLLDRAFTKAAILAEVGDISPPGPAGV
ADALAAAALTRAIDVAPQFVKEGLQEHKVGPHRAAFVREVAGVEFIDDSKATNPHAARSS
ILAHPHVVWIAGGRLKGAAVEDLVEEVADRLVAAVLIGVDAPVIAAALARHAPEVPVVEV
RAGDDAVMADDPLRPDEADAVMAAAVRTAAGYARAGDTVLLAPAAASLDMFADYTHRGRS
FADAVHALEDGDIGRQP
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaggatggtcgaacattctccgcgggccctgcgatcaccggggcccatgctcgaa
ttcctgcgcgggcgtgacgtgctcgtcgccggctggggcatctccgggcgctcgctggtc
gagccgttgcgcgacatcggcgcgcatcccgtcgtcaccgacagcggcgcgaaggcgctg
gccgaggccgccgaactcggcctggaggtggccacctcggtcgagctcgagagcgccgac
ctgagccggttcgcgctggtcatcaccagcccgggctggcggccggactcgccggtgttg
gtctcggcggtcaccgagggcatcccggtctggggcgatgtcgagttcgcctggtgggtg
gaccaggcccgcatctacgggccggtgcgcaagtggctggtcgtcaccggcaccaacggc
aagaccaccaccactcagatgacgcacgccatcctgcgcgcggcggggatcgcgagcgtc
gcctgcggcaacatcgggctgccgatcctggacgcgctgcgccgcaaccccggtccgcag
gtgctggcggtggaactgtcgagcttccagctgcactgggctccctcggtacgcccggag
gcgggcgtggtgctcaacgtcgccgaggaccatctggactggcacggcgggctggacgcc
tacgccgcggccaaggccagggcgctggtcgggcggatcggcgtggtcggcctggacgat
ccggtggccgcggcgctggcccggcgctccaaggcccggcgcacggtcggcttccgggtc
ggtgtgcccgccgacggcgagctgggcgtggtggacggcaaactgctcgaccgcgcgttc
accaaggccgcgatcctggccgaggtgggcgacatcagcccgcccgggcccgccggtgtc
gccgacgcgctggccgccgccgcgctgaccagggccatcgacgtcgcgccgcagttcgtc
aaggagggcctgcaggagcacaaggtgggcccgcaccgggcggcgttcgtgcgggaggtg
gccggtgtcgagttcatcgacgactccaaggccaccaacccgcacgcggcccgctcctcg
atcctggcccacccgcacgtggtctggatcgcgggcggccggctcaagggcgcggccgtg
gaggacctggtggaggaggtcgccgaccggctggtcgccgccgtgctgatcggcgtcgac
gcgccggtgatcgcggccgcgttggcgcgacacgcgcccgaggtccccgtggtcgaggtg
cgcgcgggtgacgatgcagtgatggccgacgacccgctccgccccgacgaggccgacgcc
gtgatggcggcggccgtgcgcacggccgccgggtacgcccgcgcgggcgacaccgtgctg
ctcgcgcccgcggccgcctcgctggacatgttcgccgattacacccaccgtggacgcagc
ttcgccgacgcggtgcacgcgctggaagacggtgacatcgggcggcagccgtga
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