Nocardia farcinica IFM 10152: NFA_18860
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Entry
NFA_18860 CDS
T00207
Name
(GenBank) putative sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
nfa
Nocardia farcinica IFM 10152
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfa03021
]
NFA_18860
Transcription machinery [BR:
nfa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NFA_18860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_23
HTH_Crp_2
CENP-B_N
HTH_31
E3_binding
HTH_28
GntR
Motif
Other DBs
NCBI-ProteinID:
BAD56732
NIH_Japan:
nfa18860
UniProt:
Q5YYK9
LinkDB
All DBs
Position
2060697..2061518
Genome browser
AA seq
273 aa
AA seq
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MSNSMQARNEPSPSEGDGYENIEPWFEKLAALDADDPHRAVVREEILHRCLPLAHNIARR
FTNRGVEFEDLLQIARLGLVHAVDRFDLEHGDSFLGFAVPTIMGEVRRYFRDHGWAVRVP
RRMKELHQLLGPATDRLTHQLGRQPTARELASELGVELTEVTQALVARNAFTTESLDGGE
RTGEEGGALPIADRLGAVEPCYGLLEDAMAVRPLIAALPERERQVLILRFYDNKTQAEIG
RLLGCSQMQVSRILAKTLTMLREKALAEPVPAS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactcgatgcaggcacgaaacgaaccgtcgccgtcggaaggtgacgggtacgag
aacatcgagccctggttcgagaagctggccgcactggacgccgacgacccgcaccgcgcg
gtggtgcgggaggagatcctgcaccgctgcctgccgctggcacacaacatcgcccgccgg
ttcaccaaccgcggcgtcgagttcgaggacctgctgcagatcgcgcggctgggcctggtg
cacgcggtggaccggttcgacctcgaacacggcgactcgttcctcgggttcgcggtgccg
accatcatgggcgaggtgcgccgctacttccgtgaccacgggtgggcggtgcgggtgccg
cgccggatgaaggaactgcaccaactgctcggcccggccaccgaccggctgacccaccag
ctcgggcggcagccgaccgcacgggagctggcgagcgaactgggcgtggaactcaccgag
gtcacccaggcgctggtggcgcgcaacgcgttcaccaccgagtccctcgacggtggcgag
cggaccggcgaggagggcggtgcgctgccgatcgccgaccgcctgggcgcggtggaaccg
tgctacgggctgctcgaggacgcgatggcggtgcgcccgctcatcgccgctctgcccgaa
cgcgaacgccaggtgctgatcctgcggttctacgacaacaaaacccaggccgagatcggc
cgcctgctcggttgctcgcagatgcaggtgtcgcgcatcctggccaagacgctgaccatg
ctgcgggagaaggcgctggccgagccggtgcccgcctcctga
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