Nocardia farcinica IFM 10152: NFA_1920
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Entry
NFA_1920 CDS
T00207
Name
(GenBank) putative arabinosyltransferase
KO
K11386
arabinosyltransferase B [EC:2.4.2.-]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa00572
Arabinogalactan biosynthesis - Mycobacterium
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00572 Arabinogalactan biosynthesis - Mycobacterium
NFA_1920
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
nfa01003
]
NFA_1920
Glycosyltransferases [BR:
nfa01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
NFA_1920
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arabinose_trans
Arabino_trans_C
Arabino_trans_N
Motif
Other DBs
NCBI-ProteinID:
BAD55034
NIH_Japan:
nfa1920
UniProt:
Q5Z3F7
LinkDB
All DBs
Position
194138..197380
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AA seq
1080 aa
AA seq
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MVGALGALLALATPFLPVKQTVAVLNWPQGGTLQNVQAPLMAQVPIDLAASIPCSAVDAL
PAQGGMLLATAPPQGDRAALEAMFVRVSENSVDVVNRNAVVASAERARMGECSAIRIASD
NARTTAVFEGMQREIERPVQGGAPGQTELVRVPVEGTMPGDFRPQVVGVFSDLEGAVPAG
LSFDMTVDTRFSSSPTWIKLTAMLAAVLCTIIALAALARLDGSDGRGHRRFLPANWFKPT
WADGAVLGTLVLWHFIGANTSDDGYILNMVRVAPEAGYMANYFRWYGVPEAPFGWYYYVI
QVFAEVSTASPWVRLPALFCAILCWMVISREVVPRLGRGVRTSKVALWTGGLVFLAFWLP
FDNGLRSEPIVALGALLTWVSIERAIATGRLLPAAVAVLIAAFTLAAAPTGLMCVAALLA
GTRPLVRIVVRRHREHGTLPLLAPIAAAGLLVLTVVYSDQTFAGIQEANRVRQATGPNLA
WYEDYLRYYYLFVETVDGSLSRRFAFLVMLLCLFTTMLVLLRRRRVPGIASAPTWRLMGI
VFGTIFFMMFNPTKWTHHFGAYAGIAGSLAAVTAVAVSASALRARKNRAIFLAGLLFVLA
IAFSGINGYWYVSSFGVPWFDKQISLRGYQSNTLMLVLFGVALALVAWFTLREDYTAPQP
SAKTVRGRRIRKFAAIPLTVVAALMVALEVLSLAKGAVSQYPAYSLARSNVDALRGNMCG
LANDVLVEPDPNDGQLTPIIDPNEPPANGDPLAGANPVGFDPNGVPDDLSADSVEVKPGT
GNTSTQSVGAAFAEGENAGTGGGQGARGVNGSTVALPFGLDPATTPVMGSYQAGVQQPAH
LVSSWYALPQRSADRPLIVISAAGRVLSFDDTGAMKYGQELKVEYGKRGPDGTVTKQGEY
LPRDIGPFPSWRNLRVPLDELAPDADAVRIVANDPILIGDQWLAFTPPRMPTLQSLDDYL
GSRQPILLDWAVGLQFPCQRPFFHENGVAEVPRYRVLPDRPLAVSSTNTWQAQEFGGPLG
FAQMLARSTTIPTYLKDDWARDWGSLERYDQYDQSAVPAELSTTTTTRHGLWSPGAMRVS
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
gtggtcggcgcgctgggcgctctgctggcgttggcgaccccgttcctgccggtcaagcag
accgtggcggtgttgaactggccgcagggcggcacgctgcagaacgtgcaggcgccgctg
atggcgcaggtgccgatcgacctcgccgcgagcatcccgtgttcggccgtggacgcgctg
cccgcgcagggcggcatgctgctggccaccgcgccgccgcagggcgaccgcgcggcgctg
gaggcgatgttcgtccgggtctcggagaactcggtggacgtggtgaaccgcaacgccgtg
gtcgcctcggccgagcgggcgcggatgggcgagtgctcggccatccgcatcgcctccgac
aacgcccgcaccaccgcggtgttcgagggcatgcagcgcgagatcgagcggccggtccag
ggtggcgcgccggggcagaccgaactggtgcgcgtgccggtcgagggcaccatgcccggt
gacttccggccgcaggtggtgggggtgttctccgatctcgagggtgcggtgcccgccggg
ctgagcttcgacatgaccgtcgacacccggttcagctccagccccacctggatcaagctg
accgcgatgctggccgcggtgctgtgcacgatcatcgccctggccgcgctggcccgcctg
gacggcagcgacggccgcggccaccgccggttcctgcccgccaactggttcaagccgacc
tgggccgacggcgcggtgctcggcacgctggtgctgtggcacttcatcggcgccaacacc
tccgacgacggctacatcctcaacatggtccgggtggcgccggaggccggttacatggcc
aactacttccgctggtacggcgtgccggaggcgccgttcggctggtactactacgtcatc
caggtcttcgccgaggtgtccacggccagtccgtgggtgcgcctgcccgcgctgttctgc
gcgatcctgtgctggatggtgatcagccgcgaggtggtgccgcggctcggacgcggggtg
cgcaccagcaaggtggcgctgtggaccggcgggctggtgttcctggcgttctggctgccg
ttcgacaacggcctgcgctcggagccgatcgtggcgctcggcgcgctgctgacctgggtc
tccatcgaacgcgcgatcgcgaccgggcgcctgctgccggccgcggtggcggtgctgatc
gcggcgttcaccctggccgcggccccgaccgggctgatgtgcgtggccgcgctgctggcc
ggtacccggccgctggtgcggatcgtggtgcgccgccaccgcgagcacggcacgctgccg
ttgctcgcgccgatcgcggcggcgggcctactggtgttgacggtggtctacagcgaccag
acgttcgcgggcatccaggaggccaaccgggtgcgccaggcgaccggcccgaacctggcc
tggtacgaggactacctgcgctactactacctgttcgtcgagacggtggacgggtcgctc
tcgcgccggttcgccttcctggtgatgctgctgtgcctgttcaccaccatgctggtgctg
ctgcggcgcaggcgcgtgcccggcatcgccagcgcaccgacctggcggttgatgggcatc
gtgttcggcacgatcttcttcatgatgttcaacccgacgaagtggacccaccacttcggc
gcgtacgcgggcatcgcgggctcgctggccgcggtgacggcggtcgcggtgtcggccagt
gcgctgcgggcacgcaagaaccgggcgatcttcctggccggtctgctgttcgtgctggcc
atcgcgttctcgggtatcaacggctactggtatgtctccagcttcggcgtgccgtggttc
gacaagcagatctcgctgcgcggctaccagtcgaacacgctgatgctggtgttgttcggt
gtcgcgctggcgctggtggcctggttcaccctgcgcgaggactacaccgcgccgcagccc
tcggccaagaccgtgcgcggcaggcgcatccgcaagttcgccgcgatcccgctgaccgtg
gtcgccgcgctgatggtggcgctcgaggtgctgtcgctggccaagggcgcggtctcgcag
tacccggcctactcgctggcgcgctcgaacgtcgacgccttgcgcggcaacatgtgcggc
ctggccaacgacgtgctcgtcgaacccgaccccaacgacggacagctcaccccgatcatc
gatccgaacgagccgccggcgaacggcgacccgctggccggcgcgaacccggtcggcttc
gatcccaacggggtgccggacgacctgtccgccgacagcgtcgaggtgaagccgggcacc
ggtaacacctccacccagtcggtcggcgcggccttcgccgagggcgagaacgcgggcacc
ggcggcggccagggcgcccgcggcgtgaacggcagcaccgtggcgctgccgttcggcctg
gatccggcgaccactccggtgatgggcagctaccaggccggggtgcagcagcccgcgcac
ctggtgtcgagctggtacgcgctgccgcagcggtcggcggatcgcccgctgatcgtgatc
tcggcggccggccgggtgctgtccttcgacgacaccggtgcgatgaagtacggccaggaa
ctcaaggtcgagtacggcaagcgcgggcccgacggcaccgtgaccaagcagggcgagtac
ctgccgcgtgacatcggcccgttcccgtcctggcgcaacctgcgggtgccgctggacgag
ctcgcccccgacgccgacgcggtgcggatcgtggccaacgacccgatcctgatcggcgac
cagtggctggcgttcacgccgccgcggatgccgaccctgcagtcgctcgacgactacctc
ggctcgcgtcagccgatcctgctggactgggccgtcggtctgcagttcccgtgccagcgg
ccgttcttccacgagaacggcgtggcggaggtgccgcgctaccgggtgctgccggaccgg
ccgctcgcggtgagctccaccaacacctggcaggcccaggagttcggcggcccgctcggc
ttcgcgcagatgctcgccaggtcgaccaccattccgacctatctgaaggacgattgggcc
agggactggggctcgctcgagcgctacgaccagtacgaccagagcgcggtgcccgccgag
ctgagcaccacgaccaccacccggcacgggctgtggtcgccgggtgcgatgcgggtgtcc
tga
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