Nocardia farcinica IFM 10152: NFA_1950
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Entry
NFA_1950 CDS
T00207
Symbol
aftA
Name
(GenBank) putative arabinofuranosyltransferase
KO
K13686
galactan 5-O-arabinofuranosyltransferase [EC:
2.4.2.46
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa00572
Arabinogalactan biosynthesis - Mycobacterium
nfa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00572 Arabinogalactan biosynthesis - Mycobacterium
NFA_1950 (aftA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
nfa01003
]
NFA_1950 (aftA)
Enzymes [BR:
nfa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.46 galactan 5-O-arabinofuranosyltransferase
NFA_1950 (aftA)
Glycosyltransferases [BR:
nfa01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
NFA_1950 (aftA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AftA_N
AftA_C
Cytochrom_B561
Motif
Other DBs
NCBI-ProteinID:
BAD55037
NIH_Japan:
nfa1950
UniProt:
Q5Z3F4
LinkDB
All DBs
Position
complement(203132..205234)
Genome browser
AA seq
700 aa
AA seq
DB search
MPEGNADQEPEVGAPMTTSDRGRLRPLVRQVGGGVGEAIAAALVAVVVAAVGLVAFSLVE
WPAFNSSHVTRALTTVGQVVAAALLVAAIVLVRRRRAPRLAALLSWAGIAAFVTVTLGMP
LAATKLYLFGVSVDQEFRTEYLTRLTDSPALRDMTYADIPPFYPAGWFWVGGRVADVLGM
SGWEAFKPYAIGSLAVAAVLALVLWTRLIRTDWAIAVTAASTAVALAFASPEAYSAVIVL
LLPPALVLAWGALHRPVSDGLVADDSAVAEPPATTAERAAVPEQAGSAVPASAGGWGAVV
GTGLFLGLAATFYTLYLGVAAFAVTLMGLLAAFLAVRAAKQTRRPRRGTAVVATGPVWRA
ALPPLVRLLVIAVIAALIAAVVWTPVLVEMLRSTTPRSGTALHYLPRAGAELPLPMLEFS
LLGALCLIGTIWLVVRASSSRRAQALGVGVLAIYLWTLLSMLVTAAGTTLLSFRLEAPLL
ALLATAGAFGFVEGARAAYQAFNEPERFRVAVAVVAVLGALAFAQDIPHVLAPEITTAYT
DTDGDGERADKRPPGAASYYREIDAALREQTGRPRDETVVLTADTTFLAFYPYFGFQALT
SHYANPLADFAGRAALIRQWSELDSPAALRAALAESPWRAPDAFLFRRSGETYTLRLAED
VYPNDPNVRRYTVSFPAALFDDPAFTSTDIGPFTLVTVRD
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaggggaacgcggatcaggagccggaggttggcgcaccgatgacgacgagcgac
agggggcggctgcggccgctggtgcgtcaggtgggcggcggtgtcggcgaggcgatcgcg
gcggccctggtggcggttgtcgtggccgcggtgggcctggtcgccttctcgctggtcgag
tggcccgcgttcaactcctcccacgtgacccgcgcgctcaccacggtcggccaggtggtc
gcggcggcgctgctcgtcgcggcgatcgtgctggtgcgcaggcgccgcgccccgcgtctc
gcggcactgctgtcgtgggcgggtatcgccgccttcgtgaccgtgacgctcggcatgccg
ctggccgccacgaagctgtacctgttcggtgtctcggtcgatcaggagttccgtaccgag
tacctgacccggctcaccgacagccccgcgctgcgtgacatgacctacgccgacatcccg
ccgttctatccggccggctggttctgggtcggcggccgggtggccgacgtgctggggatg
tcgggctgggaggcgttcaagccctacgcgatcggctcgctggcggtcgcggcggtgctg
gcgctggtgctgtggacgcggctgatccggaccgactgggccatcgcggtcacggcggcg
agcacggccgtcgcgctcgccttcgcctcgcccgaggcctacagcgccgtcatcgtgctg
ctgctgccgcccgcgctggtgctggcctggggggcgctgcaccggccggtctcggacgga
ctggtcgccgatgacagcgccgtcgcagagccgcccgccaccaccgcggagcgagccgcg
gtgcccgagcaggccggttcggccgttcccgcgagcgcgggcggctggggcgcggtggtc
ggcaccgggcttttcctcggtttggcggccaccttctacaccctctacctgggcgtcgcg
gcgttcgcggtgacgctgatggggctgctcgcggccttcctcgccgtccgggcggccaag
cagacacgacggccgcggcggggcacggcagtcgtcgcgaccgggccggtctggcgcgcg
gcgctaccgccgctggttcggctgctcgtgatcgcggtgatcgcggcgctcatcgcggcg
gtggtgtggacacccgtgctcgtggagatgctgcgctcgaccacgccgcgctcgggcacc
gctctgcactacctgccccgggcgggcgccgagttgccgttgccgatgctggagttctcg
ctgctgggcgcgctgtgcctgatcggcacgatctggctggtggtgcgggcctcgtcgtcg
cggcgcgcccaggcgctcggcgtcggcgtgctggcgatctatctctggacgctgctgtcg
atgctggtgacggcggcggggacgacgctgctgtcgttccggttggaagcgccgctgctg
gcactgctggcgaccgcgggcgcgttcggtttcgtcgagggggcgcgggcggcctaccag
gcgttcaacgagcccgagcgattccgggtcgcggtcgcggtggtcgcggtgctcggcgcg
ctcgccttcgcccaggacattccgcacgtgctcgcaccggagatcaccaccgcctacacc
gacaccgacggcgacggcgaacgcgccgacaagcgcccgcccggcgccgcctcctactac
cgcgagatcgacgccgcgctgcgcgagcagaccggcaggccgcgcgacgagacggtcgtg
ctcaccgccgacacgacctttcttgccttctacccctacttcgggttccaggcgctgacc
tcgcactacgccaacccgctcgccgacttcgcgggccgcgccgccctgatccggcagtgg
agcgagctggactcccccgccgccctgcgggccgcgctggccgagagcccctggcgcgcc
cccgacgcgttcctgttccggcgcagcggcgagacctacacgctgcgattggccgaggac
gtctatcccaacgaccccaacgtccgccgttacacggtgagcttcccggcggcgctgttc
gacgaccccgccttcaccagcaccgacatcggcccgttcacgctggtcaccgtgcgggac
tga
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