Nocardia farcinica IFM 10152: NFA_19900
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Entry
NFA_19900 CDS
T00207
Name
(GenBank) putative 3-methylpurine DNA glycosylase
KO
K03652
DNA-3-methyladenine glycosylase [EC:
3.2.2.21
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NFA_19900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfa03400
]
NFA_19900
Enzymes [BR:
nfa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
NFA_19900
DNA repair and recombination proteins [BR:
nfa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NFA_19900
Prokaryotic type
NFA_19900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pur_DNA_glyco
Motif
Other DBs
NCBI-ProteinID:
BAD56836
NIH_Japan:
nfa19900
UniProt:
Q5YYA5
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All DBs
Position
2161117..2161755
Genome browser
AA seq
212 aa
AA seq
DB search
MAVVSVEELVVDPPTAARRLLGATLRSGQVAVRLVEVEAYGGDAEGPWPDPASHSGRGRT
KRNAVMFGPAGYLYVYLSYGMHTCVNVTTGPDGTAGAVLLRAGEVVDGLDVVRGRRPTAR
TDADLARGPGNFGTALGIALDDYGTALFDPAAPIRLELADPLPAALIADGPRVGVSSEAD
RPWRFWLPSSPAVSAYRRSPRAPGAATVRAPR
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcgtgtctgtcgaggaactggttgtcgatccacccaccgccgcccgccggctg
ctcggtgccaccctgcgctccggccaggtcgcggtccggctcgtcgaggtcgaggcctac
ggcggggatgcggagggcccgtggccggatccggcctcgcactccggtcgcggccggacc
aagcgcaacgccgtgatgttcggccccgccggttacctctacgtctatctgagctacggg
atgcacacctgcgtcaacgtgaccaccgggcccgacggcaccgccggcgcggtgctgctg
cgcgcgggcgaggtggtcgacgggctcgacgtcgtgcgcggccggcgtcccaccgcccgc
accgacgccgacctcgcccgcgggccgggcaacttcggcaccgccctcggcatcgcgctc
gacgactacggcaccgcgctgttcgacccggccgccccgattcgcctggagctggccgac
ccgctgcccgcggcgctgatcgccgacggcccccgcgtcggcgtgagcagcgaggccgac
cggccctggcggttctggctgccgtcctcgcccgccgtctcggcctaccggcgcagcccc
cgtgcgcccggcgcggccacggtgcgcgccccgcggtga
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