Nocardia farcinica IFM 10152: NFA_19960
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Entry
NFA_19960 CDS
T00207
Symbol
tlyA
Name
(GenBank) putative cytotoxin/hemolysin
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
nfa
Nocardia farcinica IFM 10152
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nfa03009
]
NFA_19960 (tlyA)
Enzymes [BR:
nfa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
NFA_19960 (tlyA)
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
NFA_19960 (tlyA)
Ribosome biogenesis [BR:
nfa03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
NFA_19960 (tlyA)
23S rRNA modification factors
NFA_19960 (tlyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
BAD56842
NIH_Japan:
nfa19960
UniProt:
Q5YY99
LinkDB
All DBs
Position
2172201..2173022
Genome browser
AA seq
273 aa
AA seq
DB search
MARRARVDAELVRRGLARSREHAVELIGAGRVLIAGTVASKPATAVEPGTPLVVREQPDE
VQWASRGAHKLLGALERFERAGLRVAGKRCLDAGASTGGFTDVLLSREAREVVAVDVGYG
QLVWRLRTDERVRVFDRTNVRTLTPELIEGAVELVVGDLSFISLGLVLPALASCCAEGAD
LLPMVKPQFEVGKERVGSGGVVRDPALRAEAVCGVAAAAAEHGLRTVGAVASPLPGPSGN
VEYFLWLRKDGPFEYDAAQVRELVARAVEEGPR
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
gtggccaggcgcgcacgagtggacgccgaactggttcgccgcgggttggcgcgatcgcgg
gagcacgcggtcgagctgatcggcgcgggacgcgtcctgatcgctggaacggtcgcctcg
aaaccggcgaccgcggtggaacccggcaccccgctggtggtgcgggaacagcccgacgag
gtgcagtgggcctcgcgcggcgcgcacaaactgctcggcgcgctggaacgtttcgagcgt
gcggggctgcgcgtggcgggcaaacggtgcctggacgccggcgcgtccaccggaggtttc
accgatgtgctgctcagccgggaggcccgcgaggtggtggccgtcgacgtcggatacggc
cagctggtctggcggttgcgcaccgacgagcgggtgcgggtgttcgaccgcaccaacgtg
cgcacgctgacgccggaactgatcgagggcgccgtcgagctggtggtcggtgacctgtcg
ttcatttcgctggggttggtgctgcccgcgctggcctcctgctgtgccgagggcgccgat
ctgctgccgatggtgaagccgcagttcgaggtcggcaaggaacgggtgggatccggtggc
gtggtgcgtgatccggcgctgcgcgccgaggcggtgtgcggggtcgccgccgccgcggcc
gaacacgggctgcggacggtgggcgcggtggccagtccgctgcccgggccgtcgggcaat
gtcgagtacttcctgtggctgcgcaaggacgggccgttcgagtacgacgcggcacaggtg
cgcgagctggtcgcgcgggcggtcgaggaggggccacgatga
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