Nocardia farcinica IFM 10152: NFA_19980
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Entry
NFA_19980 CDS
T00207
Symbol
recN
Name
(GenBank) putative DNA repair protein
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
nfa
Nocardia farcinica IFM 10152
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfa03400
]
NFA_19980 (recN)
DNA repair and recombination proteins [BR:
nfa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NFA_19980 (recN)
TLS (translesion DNA synthesis) factors
Other SOS response factors
NFA_19980 (recN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_22
AAA_23
AAA_21
ABC_tran
AAA_29
Syntaxin
Motif
Other DBs
NCBI-ProteinID:
BAD56844
NIH_Japan:
nfa19980
UniProt:
Q5YY97
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All DBs
Position
2173971..2175737
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AA seq
588 aa
AA seq
DB search
MLTEIRIDSLGVISAATAQFHEGFTVLTGETGAGKTMVVTSLHLLGGARADAGRVRLGAN
KAVVEGRFTVEDLNEDARGQVAEVLESAAAEADDDGSVIAIRTVSSDGRSRAHLGGRSVP
ASVLADFTSSLLTVHGQNDQLRLQKPEQQLAALDRFAADTVGPLLRKYQVLRRAWLDART
ELLERTARSRELALEADRLKHSLDEIDAVAPEPGEDVRIVDEVRRLSDLDSLREAAAVAH
DALAGPADAPEDGSGALDLLGAARARLEAAEDPALSALAPRLGEAIAVVVDLTTELSGYL
SDLPSDPGALDSLLTRQAELKSLTRKYAPDIDGVLAWAAEARTRLGSLDVSEEALTKLAA
EVDIAAERVRAAAVKLTAARTKAAGKLAAAVSAELAGLAMGKAKLEVQVRAVPAAAQDSA
PLTVDGVELHAGATGVDEVEFRLAAHSGAQSLPLSKSASGGELSRVMLALEVVLAGSDHG
ATMVFDEVDAGVGGRAAVEIGRRLARLARTHQVIVVTHLPQVAAFADTHLVVDKSDEGGT
VNSGVRALTKDERVVELARMLAGLDDTETGRAHAEELLEMARAERASV
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgctgacagagatcaggattgacagtctcggtgtcatatccgcggccaccgcgcagttc
cacgagggtttcacggtcctgaccggtgagaccggcgcgggcaagaccatggtggtgacc
agcctgcatctgctcggcggggcgcgcgcggacgcgggccgggtgcggctcggcgcgaac
aaggccgtggtggagggccggttcaccgtcgaggacctgaacgaggacgcccgcggccag
gtggccgaggtgctcgaatcggcggcggccgaggccgacgacgacggcagcgtcatcgcc
atccgcaccgtgagcagtgacggccgctcccgcgctcatctgggcggtcgcagcgtgccc
gcctcggtgctggccgacttcacctcctcgctgttgaccgtgcacggtcagaacgatcag
ttgcgcctgcagaagcccgagcagcagttggccgcgctggaccggttcgccgccgacacc
gtgggtccgttgctgcgcaagtatcaggtgctgcgccgcgcctggctcgacgcgcgcacc
gaactgctggagcgcacggcgcgcagccgggagctggcgctggaggccgatcggctcaag
cactccctcgacgagatcgacgccgtcgcgcccgagccgggggaggacgtgcgcatcgtc
gacgaggtgcgcaggctcagcgatctggattcgctgcgcgaggcggcggccgtcgcccac
gacgcgctcgccgggcctgccgacgcgcccgaggacggctcgggcgcgctggacctgctc
ggggccgcgcgggcgcggttggaggcggccgaggatccggcgctgtcggcgctggcgccg
cggttgggcgaggcgatcgccgtggtggtcgacctgaccaccgagctgagcggttatctg
tcggatctgccctcggatccgggtgcgttggattcgctgctgacccggcaagccgaattg
aagagcctgacccgcaagtacgcccccgacatcgacggtgtgctggcctgggcggccgaa
gcccggacgcggctcgggtcgctggacgtgtcggaggaggcgctgacgaagctggccgcc
gaggtcgacatcgcggccgagcgggtgcgcgcggcggcggtgaagttgaccgccgcgcgg
accaaggccgcgggcaagttggccgccgcggtgagtgcggaactcgcggggctggcgatg
gggaaggcgaagctggaggtgcaggtgcgtgcggtgcccgcggccgcgcaggattcggcg
ccgctgaccgtcgacggcgtcgaactgcacgcgggcgccaccggcgtggacgaggtcgag
ttccggctggccgcgcattcgggcgcgcagtcgttgccgttgagcaagagcgcctccggt
ggtgagctctcgcgggtgatgctggcgctggaggtggtgctcgccgggtccgaccacggg
gcgacgatggtgttcgacgaggtcgacgccggtgtcggcggccgggccgcggtggagatc
gggcgcaggctggcccggctggcgcgcacgcaccaggtgatcgtggtgacgcatctgccg
caggtggcggcgttcgcggatacgcacctggtggtcgacaagtccgacgagggcggcacg
gtgaacagtggcgtgcgggcgctcaccaaggacgagcgggtggtggagctggcgcgcatg
ctggccggcctggacgacaccgagaccggccgcgcgcacgcggaggaactgctggagatg
gcgcgcgccgaacgggcgagcgtctga
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