Nocardia farcinica IFM 10152: NFA_20110
Help
Entry
NFA_20110 CDS
T00207
Name
(GenBank) putative pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
nfa
Nocardia farcinica IFM 10152
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nfa03009
]
NFA_20110
Enzymes [BR:
nfa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
NFA_20110
Ribosome biogenesis [BR:
nfa03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NFA_20110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BAD56857
NIH_Japan:
nfa20110
UniProt:
Q5YY84
LinkDB
All DBs
Position
2188204..2188917
Genome browser
AA seq
237 aa
AA seq
DB search
MLAKAGVASRRAAEEMIDQGRVEVDGVIVREQGLRIDPQTAVVRVDGVRVVVRDEQVYVA
LNKPKGWQSTMSDDLGRPCVGDIVAERIAAGQRLFHVGRLDADTEGLLLLTNDGDLAHRL
MHPSFEVSKTYLATVHGEVHHKVIGKRLRDGIELEDGPAKVDRFQVLELGEGRSLVKIVL
HEGRKHIVRRLLDAVGHPVTRLVRTHIGPVALGDQRPGTLRVLGRDEIGKLYEAVSL
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgccaaggccggtgtcgcctcgcgtcgcgccgccgaggagatgatcgaccagggc
cgggtcgaggtcgacggcgtcatcgtgcgcgagcagggcctgcgcatcgacccgcagacc
gccgtggtccgcgtcgacggtgtccgcgtggtggtgcgcgacgagcaggtctacgtcgcg
ctgaacaagccgaagggctggcagtccaccatgtccgacgatctgggccgcccgtgtgtc
ggcgacatcgtcgccgagcggatcgcggccgggcagcgcctgttccacgtcgggcgcctc
gacgccgacaccgagggcctgctgctgctcaccaacgacggcgacctggcgcaccggctg
atgcacccgtccttcgaggtctccaagacctacctggcgaccgtgcacggcgaagtccac
cacaaggtgatcggcaagcggctgcgcgacggcatcgagctcgaggacggccccgccaag
gtggaccgcttccaggtgctcgaactcggcgagggccgttcgctggtcaagatcgtgctg
cacgaggggcgcaagcacatcgtgcgcaggttgctcgacgcggtgggccacccggtgacc
cggctggtgcgcacccacatcggcccggtcgcgctgggcgaccaacggcccggcaccctg
cgcgtgctcggccgcgacgaaatcggcaaactctacgaggcggtgtcgctgtga
DBGET
integrated database retrieval system
