Nocardia farcinica IFM 10152: NFA_2330
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Entry
NFA_2330 CDS
T00207
Symbol
vsr
Name
(GenBank) putative DNA mismatch endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
nfa
Nocardia farcinica IFM 10152
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfa03400
]
NFA_2330 (vsr)
DNA repair and recombination proteins [BR:
nfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
NFA_2330 (vsr)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
EcoRII-C
Motif
Other DBs
NCBI-ProteinID:
BAD55075
NIH_Japan:
nfa2330
UniProt:
Q5Z3B6
LinkDB
All DBs
Position
complement(243762..244232)
Genome browser
AA seq
156 aa
AA seq
DB search
MIATDPATSARMSRQRRTGTAPELALRRELHRRGLRYFVDRAPLRGQRRRADVVFPRRKL
AVYVDGCFWHRCPQHATDPKNNGRWWADKLAGNVARDRATDEALRAAGWQVVRVWEHEDP
IAAADRVQAALSAEPAPGPTSAGRARPHDSTPPSPR
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgcgaccgacccggccaccagcgccaggatgtcgcggcagcggcgcaccggcacc
gcgccggagcttgcgctgcgccgggaactgcaccggcgcgggctgcgctacttcgtcgat
cgcgcgccgcttcgtgggcagcgccgccgcgccgacgtggtgttcccgcggcgcaagctc
gccgtctatgtcgacgggtgcttctggcaccgttgcccgcagcacgccaccgatccgaag
aacaacggtcggtggtgggcggacaagctggcgggcaacgtggcgcgcgatcgcgccacc
gacgaggcgctgcgcgccgcgggctggcaagtggtccgcgtctgggagcacgaggacccg
attgccgccgccgaccgcgtgcaggccgcgctcagcgccgagcccgcacccggaccaacg
tccgcggggcgtgcgcggccacatgactcgacgccgccatcgccgcgatga
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