Nocardia farcinica IFM 10152: NFA_25450
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Entry
NFA_25450 CDS
T00207
Symbol
recC
Name
(GenBank) putative RecC protein
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NFA_25450 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfa03400
]
NFA_25450 (recC)
Enzymes [BR:
nfa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NFA_25450 (recC)
DNA repair and recombination proteins [BR:
nfa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NFA_25450 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
BAD57392
NIH_Japan:
nfa25450
UniProt:
Q5YWP9
LinkDB
All DBs
Position
2707545..2710883
Genome browser
AA seq
1112 aa
AA seq
DB search
MPLHIRRAERADILADALAARLAVPQPDPFAAEVVAVPAKGVERWLTQRLSAVLGVSAGG
RDGVAANIRFPSPAALVAEALAACTGIAPEDDPWAHQRVVWTLLRVIDRAVAEPWCAVLA
RHLGAPSRGRDHRIGRRYATAAQLAALFDSYAAQRPALLLDWAAGGDGDGAGGEVPADLR
WQPRLWRMLRAEIGSPSPAERLAPACERLRAEPGLLDLPERLSLFGVTRLTTDQLAVLDA
VGAGREVDVWLVHPSPALWSALADRPPARARAADTSASAVRHPLLTGLARDVRELQQRLA
GTGAIDTGPLSAPEAPSPQQLSLLAGVQAGIRDDAWPPARLPADGTVQVHACHGPARQVE
VLRDCLLGLFAADPTLEPRDVLIMCPEVEAYAPLVRAAFGARGGADEAPESAHPAHLLRV
RLADRGRGVTNPLLAVVQTLLELADGRVTVTQVLDLAASETVRRRCGFDDDAIERLREWA
AAAGARWGIGQRQRQAFGLADFAQNTLNGAVDRILLGVTADESGDDWLDLALPLDDVDSN
DVDLAGRFAEFVDRLAVCLRDLRGPRPATEWAQVLGRALELLTDVPDSQSWVRTEARAEI
AAATEHAGDVPLRLADVAVLFADRLAARPTRANFRTGELTVCTMVPMRSVPHRVVVLLGL
DDDVFPRTGGVDGDDVLAREPLLGERDPRSEDRQLLLDAVLAARERLLIFHTGADPVTGS
PRPPAIPVAELLDVVRAHVGADAMAQVLTRHPLQSFDRRNFDPAAPFSFDTVALAGARAA
ARVPEPAPPFLPEPLPPAERGDVALADLIAFAEHPVRGFLWQRLGLRVPEHEEDLADALP
IELDGLAKWELGERMLAARLTGADPAGLRAAEWRRGTLPPFRLGGAVLDEIEHTVDTLVR
VAQPDYAAAPRAVDIAVDLGDGRRLTGTVPEVRGETLVRTTFSRVAAKHRIGAWVALLAL
AATEDRSWRAVTTGRGKFRRPAWRCELTAPDRPAAVAVLRDLVRLRDEGLTEPLPIAPAS
SAAYAERRVRGGSAEDAFAAAEREFDGGPNGPDKFGEHTDRHLRYVWGTAPRLDHLAAAP
APAGSPGEPTRFGALAVRLWTPLLAAETQGQP
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgcacatccgacgggccgaacgcgcggacatcctggccgacgcgctcgccgcg
cgattggccgtgccgcagccggatccgttcgcggccgaggtcgtcgcggtgcccgccaag
ggggtcgagcgctggctgacccagcgcctgtccgcggtactcggcgtgtccgcgggcgga
cgcgacggggtcgccgccaacatccgcttcccgtcacccgcggcgctggtcgccgaggcg
ctggccgcctgcaccggcatcgcgcccgaggacgacccgtgggcgcaccagcgggtggtg
tggacgctgctgcgggtgatcgaccgcgccgtcgccgagccgtggtgcgcggtgctggcc
cgccacctcggcgcgccctcgcgcggccgcgaccaccggatcggcaggcgctacgccacc
gccgcgcagctggccgccctgttcgacagctacgccgcgcagcgtccggccctgctgctg
gactgggccgccggcggcgacggcgacggcgccggcggcgaggtgcccgcggacctgcgc
tggcagccgcgcctgtggcggatgctgcgcgccgagatcggcagcccgagcccggccgag
cggctcgcccccgcgtgcgagcggctgcgcgccgaacccggcctgctggacctgcccgag
cggctctcgctgttcggcgtcacgcgcctgaccaccgatcagctcgcggtgctcgacgcg
gtgggcgcgggccgcgaggtcgacgtgtggctggtgcatcccagtcccgcgctgtggtcg
gccctggccgaccgcccgcccgcgcgtgcccgcgccgccgacaccagcgcgagcgccgtc
cggcatccgctgctcaccgggctggctcgtgacgtccgcgaactccagcagcggctggcg
ggcaccggcgcgatcgacaccgggccgctgtccgcaccggaagcgccgtccccgcagcag
ctttcgctgctggccggcgtgcaggccggcatccgcgacgacgcgtggccacccgcgcgg
ctgcccgccgacggcacggtgcaggtgcacgcctgccacggtcccgcccgccaagtggag
gtgctgcgcgactgcctgctcggcctgttcgccgccgatccgacgctggaaccgcgcgac
gtgctgatcatgtgcccggaggtcgaggcgtacgcgccgctggtgcgggcggcgttcggc
gcccggggcggcgccgacgaggccccggagtcggcccaccccgcacacctgctgcgggtg
cgcctggccgaccgcggccgcggtgtgaccaatccactgctcgccgtcgtgcagaccctg
ctggagctggccgacgggcgcgtcaccgtgacgcaggtgctcgacctcgccgcctccgaa
accgtccgccgccggtgcggattcgacgacgacgccatcgagcggttgcgcgagtgggcc
gccgcggcgggcgcgcgctgggggatcgggcaacggcagcggcaggcgttcggattggcc
gacttcgcccagaacaccctcaacggcgccgtggaccgcatcctgctcggcgtcaccgcc
gacgaatccggcgacgactggctggatctcgcactgccgctggacgacgtggacagcaac
gacgtcgatctggccgggcgcttcgccgaattcgtcgaccgcctcgcggtgtgcctgcgc
gatctgcgcggcccgcgcccggccaccgagtgggcccaggtgctcgggcgggcgctggaa
ctgctcaccgacgtgcccgacagccagtcctgggtgcgcaccgaggcacgcgccgagatc
gcggccgccaccgagcacgccggggatgtgccgttgcggctggccgacgtcgcggtgctg
ttcgccgatcggctggccgcccggcccacacgcgccaacttccgcaccggggagctgacg
gtgtgcacgatggtgccgatgcggtcggtgccgcaccgggtggtggtgctgctcggcctg
gacgacgacgtcttcccgcgtaccggcggcgtcgacggcgacgacgtgctcgcccgggaa
ccgctgctgggcgaacgggatccgcgcagcgaggaccgccagctgctgctggacgccgtg
ctcgccgcccgcgagcgcctgctgatcttccacaccggcgccgacccggtcaccggctcg
ccgcgcccgcccgcgatcccggtcgccgaactgctcgacgtggtgcgtgcccacgtcggc
gccgacgcgatggcgcaggtgctgacccggcacccgttgcagagcttcgatcgccgcaat
ttcgaccccgccgcgccgttcagcttcgacaccgtcgcgctggccggggcccgcgccgcc
gcccgggtgcccgagccggcgccgccgttcctgcccgaaccgctgccgcccgccgagcgc
ggcgatgtcgcactcgccgacctcatcgccttcgccgagcacccggtgcgcggattcctc
tggcagcgactgggtttgcgggttcccgagcacgaggaggacctcgccgacgcgttgccc
atcgagctcgacggcctggccaaatgggaactgggcgaacggatgctcgcggcccggctc
accggcgcggacccggcgggactgcgcgccgcggagtggcggcgcggcaccctgccgccg
ttccggctcggcggtgcggtgctcgacgagatcgaacacacggtggacaccctggtgcgg
gtcgcgcagccggattacgcggccgcgccgcgcgcggtcgacatcgccgtcgacctcggc
gacggccgccggttgaccggcacggtgccggaggtccgcggggagacgctggtgcgcacc
acgttctcgcgggtcgcggccaagcaccggatcggggcgtgggtggcgctgctggcgttg
gccgccaccgaggaccggtcctggcgcgccgtcaccaccggccgggggaagttccgtcgc
ccggcgtggcgctgtgagctcaccgcaccggaccgcccggcggccgtcgcggtgctgcgc
gacctggtgcgcctgcgcgacgagggcctcaccgagccgctgccgatcgcgcccgcgtcc
tcggccgcctacgccgaacgccgggtacgcggcggctcggccgaggacgccttcgccgcg
gccgagcgcgaattcgacggcggccccaacggtcccgacaaattcggcgaacacaccgac
cggcacctgcggtacgtgtggggcaccgccccgcgcctggaccacctcgccgccgccccc
gcgcccgcgggctcgcccggtgagccgacccgcttcggcgcgttggccgtgcggctgtgg
accccgctgttggccgccgagacccaggggcaaccgtga
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