Nocardia farcinica IFM 10152: NFA_25650
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Entry
NFA_25650 CDS
T00207
Name
(GenBank) putative decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa00300
Lysine biosynthesis
nfa00470
D-Amino acid metabolism
nfa01100
Metabolic pathways
nfa01110
Biosynthesis of secondary metabolites
nfa01120
Microbial metabolism in diverse environments
nfa01230
Biosynthesis of amino acids
Module
nfa_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NFA_25650
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NFA_25650
Enzymes [BR:
nfa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NFA_25650
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BAD57412
NIH_Japan:
nfa25650
UniProt:
Q5YWM9
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All DBs
Position
complement(2734116..2735525)
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AA seq
469 aa
AA seq
DB search
MSGEPPALPARLHPLVRAFLDDRAAVAAVADGGTPAHVVFPQVLAENVGALAAVLDRSPV
RSRMCYAHKVNRSPALARAAERCGIGIDVASPGELANARAAGFGPARIEVTGPKGARFLA
TAVASGATINVDNLWELAALDDLARGTDPIPTLLRVGDLPGTPRSRFGVPLPRVDDALRL
LAASAARIRFLGFAFHLDSGAVTDRVRAVQTCLALIERAHAHGLAPHVLDIGGGLRQVFT
ADADRFDGYVRALRAGLAGRGPAMSWPGQTFGYHVAGGAAHGTPVFHKYGNTVGAADMLA
ELLAAPLAEHEGRPLGTVLADNLLELWLEPGKALVDHAGLTLASVEFVKELGDGTVLVTL
DLSRDTVTPADQEVMVDPLVLPGARRDDGPAVGVYFAGRLCLERDLITTRQVFLPGLPAP
GDVVVFPNTAAYHMDLSASTAARWAPPRRWVVESTAAGFAARPDTEAAA
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgaaccgcccgcgctaccggcgcggctgcatccgctcgtgcgcgccttcctc
gacgaccgggccgccgtggcggccgtcgccgacggcggcacacccgcgcacgtggtgttc
ccgcaggtgctcgccgagaacgtgggcgcgctggcggcggtgctcgaccggagcccggtg
cgatcgcggatgtgctacgcgcacaaggtgaatcgctcgccggccttggcgagggcggcc
gagcggtgcggcatcggcatcgatgtcgcctcccccggcgaactggcgaacgcgcgcgcg
gcgggtttcgggccggcgcggatcgaggtgacggggccgaaaggcgcgcgcttcctggcg
acggcggtggcgtcgggcgccacgatcaacgtggacaacctctgggaactcgccgccctc
gacgacctcgcccgcggcacggacccgataccgacgctgctgcgcgtcggtgacctcccc
gggacgccgcgcagccgtttcggtgtgccgctgccccgggtggacgacgccctgcggctg
ctggccgcgtccgccgcgcggatccggttcctcggcttcgcctttcacctcgattccggc
gcggtgaccgatcgggtgcgcgccgtgcagacctgcctggcattgatcgaacgcgcccac
gcccacggcctcgccccgcacgtgctcgacatcggcggcgggctgcgccaggtgttcacc
gccgacgccgaccgtttcgacggctacgtccgcgcgttgcgcgccgggctggccgggcgt
gggcctgcgatgagctggccggggcagaccttcgggtatcacgtcgcgggcggtgcggcc
cacggcacgccggtgttccacaagtacggcaacaccgtcggcgcggccgacatgctcgcc
gaactgctggccgccccgctggccgagcacgagggtcgcccactgggcacggtgctggcc
gacaacctgctcgagctctggctggagccgggcaaggcgctggtcgaccacgcggggctg
acgctggcgagcgtggagttcgtcaaggaactcggcgacggcacggtgctggtcaccctc
gacctcagccgcgacacggtgacccccgccgaccaggaggtgatggtcgacccgctggtc
ctgcccggtgcgcggcgcgacgacggtcccgcggtgggggtctacttcgcgggcaggctg
tgtctcgaacgcgacctgatcacgacccggcaggtgttccttcccggcctgcccgcgccc
ggtgacgtggtggtcttcccgaacaccgccgcctatcacatggatctgtccgcctcgacc
gcggcgaggtgggcaccgccgcggcggtgggtcgtggagtccaccgcggcgggtttcgcg
gcgcgccccgacaccgaggccgccgcctga
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