Nocardia farcinica IFM 10152: NFA_2640
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Entry
NFA_2640 CDS
T00207
Name
(GenBank) putative ABC transporter
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
nfa
Nocardia farcinica IFM 10152
Pathway
nfa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nfa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NFA_2640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nfa02000
]
NFA_2640
Transporters [BR:
nfa02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NFA_2640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_16
AAA
AAA_22
AAA_30
NB-ARC
RsgA_GTPase
nSTAND3
AAA_23
TsaE
AI-2E_transport
SRP54
AAA_18
MMR_HSR1
AAA_33
DO-GTPase2
AAA_25
AAA_29
cobW
DUF87
AAA_28
AAA_14
T2SSE
AAA_24
AAA_19
NACHT
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
BAD55106
NIH_Japan:
nfa2640
UniProt:
Q5Z385
LinkDB
All DBs
Position
270981..272900
Genome browser
AA seq
639 aa
AA seq
DB search
MRPGGPVPGAPDAKPKSFKPSLKRLLGRLAPERFYVWCIVVLAIVSVVLNTLGPYLLGKA
TNIVFDGVVGKNLEQMRGLSKEEAVERLRDSGNDTLADMLSAMNVVPGVGVDFTAVGRVL
LVVLALYLAAALFSWLQAYLLNIVINRTVKRLRSDIEDKIHRLPLRYFDSQPRGDVLSRV
TNDVDNVSQSLQQTMSQLLMSVFSVLGILIMMFWISPLLAVIALLTVPAAIVVTAQIAKR
SKPHFVNQWKYTGLVNAQVEEAYTGHEVITAFGRNREVGEEFDQRNDKLYESSFKAQFIS
GLIMPSIMFLGNVNFVLVALVGGLRVATGQLSLGEVQAFIQYSRQFSQPLTQIGTMVNLL
QSGVASAERIFEILDAEEQSPDPQLPDVRPLDRGRVEFEAVSFRYEPDKPVIERLSLVAE
PGHVVAIVGPTGAGKTTLVNLLMRFYELDAGTITIDGVDITRMSRDALRSRIGMVLQDTW
LFRGTIRENIAYGNPNASEEEILAAARAAYVDRFVHALPDGYDTMIDEEGSGVSAGEKQL
ITIARAFLAKPSILILDEATSSVDTRTELLVQQATAALRRDRTSFVIAHRLSTIRDADLI
VVMEAGRIVEHGTHQRLLEERGAYYRLYNAQFAAAAAEA
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgggtggaccggtgccgggcgcgcccgacgccaagcccaagtcgttcaagccg
tcgctgaagcggctgctgggccggctcgcacccgagcggttctacgtctggtgcatcgtg
gtgctggcgatcgtctcggtcgtgctgaacaccctcgggccgtatctgctcggcaaggcc
accaacatcgtcttcgacggtgtggtcggcaagaacctcgagcagatgcgcgggctgtcc
aaggaggaggccgtcgagcggctgcgcgactccggcaacgacaccctggccgacatgctc
agcgccatgaacgtggtgcccggcgtcggcgtcgatttcaccgcggtcggccgggtgctg
ttggtggtgctcgcgctctacctggccgcggcgctgttcagctggttgcaggcctacctg
ctcaacatcgtcatcaaccgcacggtcaagcggctgcgcagcgacatcgaggacaagatc
caccggctgccgttgcgctacttcgactcccagccgcgcggcgacgtgctcagccgggtg
accaacgacgtcgacaacgtctcgcagagcctgcagcagaccatgagccagctgctgatg
tcggtgttctcggtgctgggcatcctgatcatgatgttctggatctcgccgctgctcgcg
gtgatcgccctgctcaccgtgcccgccgcgatcgtcgtcaccgcgcagatcgccaagcgc
tccaagccgcacttcgtcaaccagtggaagtacaccggcctggtgaacgcgcaggtggag
gaggcctacaccggccacgaggtgatcaccgcgttcggccgcaaccgcgaggtgggcgag
gagttcgaccagcgcaacgacaagctctacgagtccagcttcaaggcgcagttcatctcc
ggcctgatcatgccctcgatcatgttcctcgggaacgtcaacttcgtgctcgtcgcgctg
gtcggcggcctgcgggtggcgactgggcagctctcgctgggtgaggtgcaggccttcatc
cagtactcgcgccagttcagccagccgctgacccagatcggcacgatggtgaacctgctg
caatccggggtggcctcggccgagcggatcttcgagatcctcgacgccgaggagcagtcg
ccggacccgcagctgcccgatgtgcggccgctggaccggggccgggtggagttcgaggcg
gtctcgttccggtacgagccggacaagccggtcatcgagcggctgtccctggttgccgag
ccggggcacgtggtcgcgatcgtcgggcccaccggtgcgggcaagaccacactggtcaac
ctgctgatgcggttctacgaactcgacgcgggcaccatcaccatcgacggtgtcgacatc
acccggatgagccgcgacgcgctgcgctcccgcatcggcatggtgttgcaggacacctgg
ctgttccgcggcaccatccgggagaacatcgcctacggcaatccgaacgcgagcgaggag
gagatcctcgccgccgcccgcgcggcctacgtcgaccggttcgtgcacgcgctgcccgac
ggctacgacaccatgatcgacgaggagggctccggcgtcagcgcgggcgagaagcagctc
atcaccatcgcacgcgcgttcctggccaagccgtcgatcctgatcctggacgaggcgacc
agctcggtggacacccgcaccgaactgctggtgcagcaggccacggcggcgctgcggcgg
gaccggaccagcttcgtcatcgcccatcgcctgtccaccatccgcgacgccgacctgatc
gtcgtcatggaggcgggccgtatcgtcgagcacggcacccatcagcggctgctcgaggag
cgcggcgcctactaccggctctacaacgcccagttcgccgcggccgccgcggaggcgtga
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