KEGG   Nocardia farcinica IFM 10152: NFA_28360
Entry
NFA_28360         CDS       T00207                                 
Name
(GenBank) putative DNA glycosylase
  KO
K03649  double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
Organism
nfa  Nocardia farcinica IFM 10152
Pathway
nfa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:nfa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    NFA_28360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nfa03400]
    NFA_28360
Enzymes [BR:nfa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.28  double-stranded uracil-DNA glycosylase
     NFA_28360
DNA repair and recombination proteins [BR:nfa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     NFA_28360
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: BAD57683
NIH_Japan: nfa28360
UniProt: Q5YVV8
LinkDB
Position
complement(3022429..3022983)
AA seq 184 aa
MVSAAYRPTPADLAAAAGTTIPDVVGPDLRVLFCGINPGLWSGATGHHFARPGNRFWPAL
FRSGFTPRLFRPDEQEELLALGLGITNVVPRTTAKADELTTAELREGGRALTERVRRYRP
KALAVLGIGAYRTAFGRPRTTVGRQDETIADTEIWVLPNPSGLNAHYTLDALAAEFRALR
EATR
NT seq 555 nt   +upstreamnt  +downstreamnt
atggtatcggcggcgtatcgacccacgcccgcggatctggcggccgccgccgggacgacg
attcccgacgtggtggggccggatctgcgggtgttgttctgcgggatcaatccggggctg
tggtcgggggcgaccgggcatcacttcgcgcggccgggaaaccggttctggcccgcgctg
ttccgttccggattcaccccgcgcctgttccgaccggacgagcaggaggaactgctcgcc
ttgggattgggaatcacgaacgtggtgccgcggacgacggccaaggcggacgagctgacc
accgcggagttgcgcgagggcggtcgggcgctgaccgaacgagtccggcgataccgtccg
aaagcgctggccgtgctcgggatcggcgcctaccggaccgcgttcggccgcccgcgcacc
accgtcggccgccaggacgagacgatcgccgacaccgagatctgggtgctacccaacccc
agcggactcaacgcgcactacaccctcgacgccctggccgcggagttccgcgccctccga
gaagcgacgcgctag

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